RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 PQBP1O60828 265 aaKnown RBP15.49■□□□□ 0.07
NDC1-201ENST00000371429 URODP06132 367 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 THP07101 528 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 TYK2P29597 1187 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 VGLL4Q14135 290 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 CYP4A22Q5TCH4 519 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 SDE2Q6IQ49 451 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 ZNF677Q86XU0 584 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 RNF135Q8IUD6 432 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 Q9H521 79 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 CATSPERBQ9H7T0 1116 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 VTA1Q9NP79 307 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 ZFATQ9P243 1243 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 POLR1AO95602 1720 aaPredicted RBP15.49■□□□□ 0.07
NDC1-201ENST00000371429 ERVK-9P63128 1117 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 ERVK-24P63145 666 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 HMX1Q9NP08 348 aaPredicted RBP15.49■□□□□ 0.07
NDC1-201ENST00000371429 ENTPD7Q9NQZ7 604 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 IL17RBQ9NRM6 502 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 PTPRAP18433 802 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 DHX34Q14147 1143 aaKnown RBP15.49■□□□□ 0.07
NDC1-201ENST00000371429 ZFPM1Q8IX07 1006 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 PDCD7Q8N8D1 485 aaKnown RBP15.49■□□□□ 0.07
NDC1-201ENST00000371429 EFHD1Q9BUP0 239 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 MTMR12Q9C0I1 747 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 IQGAP1P46940 1657 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 ZNF197O14709 1029 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 APRTP07741 180 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 GPD1P21695 349 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 INHBEP58166 350 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 KLHDC7AQ5VTJ3 777 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 SPDL1Q96EA4 605 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 RNF208Q9H0X6 261 aa15.49■□□□□ 0.07
NDC1-201ENST00000371429 AP3B1O00203 1094 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 CTIFO43310 598 aaKnown RBP15.48■□□□□ 0.07
NDC1-201ENST00000371429 AP1G2O75843 785 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 FXR1P51114 621 aaKnown RBP eCLIP15.48■□□□□ 0.07
NDC1-201ENST00000371429 CUL2Q13617 745 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 NAB2Q15742 525 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 SLC30A10Q6XR72 485 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 PTF1AQ7RTS3 328 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 PPHLN1Q8NEY8 458 aaKnown RBP15.48■□□□□ 0.07
NDC1-201ENST00000371429 TMCC1O94876 653 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 TAL1P17542 331 aaPredicted RBP15.48■□□□□ 0.07
NDC1-201ENST00000371429 TLK2Q86UE8 772 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 AMACRQ9UHK6 382 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 ITIH6Q6UXX5 1313 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 ATP1A1P05023 1023 aaKnown RBP15.48■□□□□ 0.07
NDC1-201ENST00000371429 GARTP22102 1010 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 ALDH5A1P51649 535 aaPredicted RBP15.48■□□□□ 0.07
NDC1-201ENST00000371429 TWF1Q12792 350 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 GTF2H3Q13889 308 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 ARHGEF7Q14155 803 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 HIF1AQ16665 826 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 PITPNM3Q9BZ71 974 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.48■□□□□ 0.07
NDC1-201ENST00000371429 REREQ9P2R6 1566 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 CYB561D2O14569 222 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 NR1I3Q14994 352 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 GRIK4Q16099 956 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 P3H1Q32P28 736 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 EPM2AIP1Q7L775 607 aaPredicted RBP15.48■□□□□ 0.07
NDC1-201ENST00000371429 MRPS31Q92665 395 aaKnown RBP15.48■□□□□ 0.07
NDC1-201ENST00000371429 CPB2Q96IY4 423 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 TUBB6Q9BUF5 446 aa15.48■□□□□ 0.07
NDC1-201ENST00000371429 TMC7Q7Z402 723 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 SLC30A1Q9Y6M5 507 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 ARHGAP23Q9P227 1491 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 PSMD3O43242 534 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 HADHAP40939 763 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 CNTN2Q02246 1040 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 CTXN3Q4LDR2 81 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 FASTKD1Q53R41 847 aaKnown RBP15.47■□□□□ 0.07
NDC1-201ENST00000371429 TBC1D1Q86TI0 1168 aaPredicted RBP15.47■□□□□ 0.07
NDC1-201ENST00000371429 RAB42Q8N4Z0 105 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 KCNB2Q92953 911 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 KLHL29Q96CT2 875 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 CBWD1Q9BRT8 395 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 TRIM55Q9BYV6 548 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 TAF1DQ9H5J8 278 aaPredicted RBP15.47■□□□□ 0.07
NDC1-201ENST00000371429 RAB6BQ9NRW1 208 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 A0A0G2JND7 137 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 CSDE1O75534 798 aaKnown RBP15.47■□□□□ 0.07
NDC1-201ENST00000371429 ESRRAP11474 423 aaPredicted RBP15.47■□□□□ 0.07
NDC1-201ENST00000371429 AKT1P31749 480 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 LIG3P49916 1009 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 PPIL2Q13356 520 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 GIT2Q14161 759 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 AIPL1Q9NZN9 384 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 SLC4A7Q9Y6M7 1214 aa15.47■□□□□ 0.07
NDC1-201ENST00000371429 CKMP06732 381 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 LAMTOR4Q0VGL1 99 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 LBRQ14739 615 aaKnown RBP15.46■□□□□ 0.07
NDC1-201ENST00000371429 PDK1Q15118 436 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 PTPAQ15257 358 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.46■□□□□ 0.07
NDC1-201ENST00000371429 TAF2Q6P1X5 1199 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 ACOT1Q86TX2 421 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 C1orf131Q8NDD1 294 aaKnown RBP15.46■□□□□ 0.07
NDC1-201ENST00000371429 DNAJB3Q8WWF6 145 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms