RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 NSL1Q96IY1 281 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 FAM161BQ96MY7 647 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 CYTH2Q99418 400 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 ANKFY1Q9P2R3 1169 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 STX18Q9P2W9 335 aaKnown RBP10.22□□□□□ -0.77
LRRC40-201ENST00000370952 UVRAGQ9P2Y5 699 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 SMG5Q9UPR3 1016 aaKnown RBP10.22□□□□□ -0.77
LRRC40-201ENST00000370952 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.22□□□□□ -0.77
LRRC40-201ENST00000370952 GOLGA8SH3BPF8 625 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 GOLGA8MH3BSY2 632 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 SPATA31D3P0C874 917 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 CYP11B1P15538 503 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 CD58P19256 250 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 RFX1P22670 979 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 TM4SF1P30408 202 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 MAN1A1P33908 653 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 CETN1Q12798 172 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 DYNC1I2Q13409 638 aaKnown RBP10.22□□□□□ -0.77
LRRC40-201ENST00000370952 ZRSR2Q15696 482 aaKnown RBP10.22□□□□□ -0.77
LRRC40-201ENST00000370952 NFIL3Q16649 462 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 MDH1BQ5I0G3 518 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 MFSD14BQ5SR56 506 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 C1orf220Q5T0J3 134 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 IZUMO2Q6UXV1 221 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 SPATA31D4Q6ZUB0 917 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 FAM71AQ8IYT1 594 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 ZBED8Q8IZ13 594 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 TMEM117Q9H0C3 514 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 DDX4Q9NQI0 724 aaKnown RBP10.22□□□□□ -0.77
LRRC40-201ENST00000370952 WRAP73Q9P2S5 460 aaPredicted RBP10.22□□□□□ -0.77
LRRC40-201ENST00000370952 SLC17A7Q9P2U7 560 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 USTQ9Y2C2 406 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 SH3BP1Q9Y3L3 701 aa10.22□□□□□ -0.77
LRRC40-201ENST00000370952 PLSCR1O15162 318 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 USP1O94782 785 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 ESRRAP11474 423 aaPredicted RBP10.21□□□□□ -0.77
LRRC40-201ENST00000370952 MXI1P50539 228 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 ARFIP2P53365 341 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 UBXN2AP68543 259 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 GABPAQ06546 454 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 SLC15A2Q16348 729 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 Q4G0T1 1027 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 KAZNQ674X7 775 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 ZCCHC9Q8N567 271 aaKnown RBP10.21□□□□□ -0.77
LRRC40-201ENST00000370952 FBXO27Q8NI29 283 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 ZNF526Q8TF50 670 aaPredicted RBP10.21□□□□□ -0.77
LRRC40-201ENST00000370952 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.77
LRRC40-201ENST00000370952 FAM84AQ96KN4 292 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 SETDB2Q96T68 719 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 POLR3CQ9BUI4 534 aaPredicted RBP10.21□□□□□ -0.77
LRRC40-201ENST00000370952 DMAP1Q9NPF5 467 aaPredicted RBP10.21□□□□□ -0.77
LRRC40-201ENST00000370952 PDP2Q9P2J9 529 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 SPATA31A5Q5VU36 1347 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 SPATA31A6Q5VVP1 1343 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 SPATA31A7Q8IWB4 1347 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 PLIN4Q96Q06 1357 aa10.21□□□□□ -0.77
LRRC40-201ENST00000370952 PI4K2BG5E9Z4 385 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 K7ENM7 598 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 TBX3O15119 743 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 ZWINTO95229 277 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 BAG2O95816 211 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 ABHD2P08910 425 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 FDX1P10109 184 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 ADSSP30520 456 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 PGM1P36871 562 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 SYDE2Q5VT97 1194 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 TAB3Q8N5C8 712 aaPredicted RBP10.21□□□□□ -0.78
LRRC40-201ENST00000370952 LINC00116Q8NCU8 138 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 TCP10LQ8TDR4 215 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 SEMA4DQ92854 862 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 CLPTM1LQ96KA5 538 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 FAM20AQ96MK3 541 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 TTC1Q99614 292 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 TMEM120AQ9BXJ8 343 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 CD209Q9NNX6 404 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 ZBTB12Q9Y330 459 aaPredicted RBP10.21□□□□□ -0.78
LRRC40-201ENST00000370952 WNK3Q9BYP7 1800 aa10.21□□□□□ -0.78
LRRC40-201ENST00000370952 PIK3CDO00329 1044 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 KCNQ2O43526 872 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 KRT10P13645 584 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 ADRA2BP18089 450 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 MOXD1Q6UVY6 613 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 TRMT1LQ7Z2T5 733 aaKnown RBP10.2□□□□□ -0.78
LRRC40-201ENST00000370952 CPA5Q8WXQ8 436 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 AZIN2Q96A70 460 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 CCDC127Q96BQ5 260 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 HSD17B14Q9BPX1 270 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 TMX4Q9H1E5 349 aaPredicted RBP10.2□□□□□ -0.78
LRRC40-201ENST00000370952 ASCC2Q9H1I8 757 aaPredicted RBP10.2□□□□□ -0.78
LRRC40-201ENST00000370952 MYH9P35579 1960 aaKnown RBP10.2□□□□□ -0.78
LRRC40-201ENST00000370952 ATRNL1Q5VV63 1379 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 F5H6K3 240 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 CREB3O43889 395 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 EEF2P13639 858 aaKnown RBP10.2□□□□□ -0.78
LRRC40-201ENST00000370952 KLRC2P26717 231 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 SSTR3P32745 418 aaPredicted RBP10.2□□□□□ -0.78
LRRC40-201ENST00000370952 SHMT1P34896 483 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 SCNN1BP51168 640 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 TAS2R40P59535 323 aa10.2□□□□□ -0.78
LRRC40-201ENST00000370952 GAD2Q05329 585 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms