RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 LNX1Q8TBB1 728 aaPredicted RBP16.18■□□□□ 0.18
LMO4-201ENST00000370542 IFT74Q96LB3 600 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 PPP1R10Q96QC0 940 aaKnown RBP16.18■□□□□ 0.18
LMO4-201ENST00000370542 NTPCRQ9BSD7 190 aaKnown RBP16.18■□□□□ 0.18
LMO4-201ENST00000370542 RAB34Q9BZG1 259 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 FAM107BQ9H098 131 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 TMEM134Q9H6X4 195 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 C17orf75Q9HAS0 396 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 KCNK12Q9HB15 430 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 ARHGAP28Q9P2N2 729 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 CACNG4Q9UBN1 327 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 TNFSF13BQ9Y275 285 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 USP20Q9Y2K6 914 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 TRIP11Q15643 1979 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 FAM237AA0A1B0GTK4 181 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 KIF4AO95239 1232 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 TXLNAP40222 546 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 PPP2R3AQ06190 1150 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 ELAVL2Q12926 359 aaKnown RBP16.17■□□□□ 0.18
LMO4-201ENST00000370542 MAPK7Q13164 816 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 TDGQ13569 410 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 GNL2Q13823 731 aaKnown RBP16.17■□□□□ 0.18
LMO4-201ENST00000370542 NCAPHQ15003 741 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 ATF7IP2Q5U623 682 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 CD300LGQ6UXG3 332 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 KRBA2Q6ZNG9 492 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 C1orf186Q6ZWK4 172 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 TAS1R3Q7RTX0 852 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 REXO1L1PQ8IX06 675 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 KIAA2013Q8IYS2 634 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 SNX29Q8TEQ0 813 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 RIN2Q8WYP3 895 aaPredicted RBP16.17■□□□□ 0.18
LMO4-201ENST00000370542 ERCC4Q92889 916 aaPredicted RBP16.17■□□□□ 0.18
LMO4-201ENST00000370542 KCNN1Q92952 543 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 NXPE3Q969Y0 559 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 CLSTN3Q9BQT9 956 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 TTPALQ9BTX7 342 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 KIFC3Q9BVG8 833 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 CARD6Q9BX69 1037 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 PRKD2Q9BZL6 878 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 POLD4Q9HCU8 107 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 FBXW11Q9UKB1 542 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 DUSP12Q9UNI6 340 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 DNM3Q9UQ16 869 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 VWA8A3KMH1 1905 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 CLUHO75153 1309 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 ATRXP46100 2492 aa16.17■□□□□ 0.18
LMO4-201ENST00000370542 PKD1L2Q7Z442 2459 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 CASTOR2A6NHX0 329 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 E9PMD0 336 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 K7ERI5 159 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 ABLIM1O14639 778 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 PPP6R2O75170 966 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 ZMYND10O75800 440 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 ZNF202O95125 648 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 SERPINC1P01008 464 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 PROZP22891 400 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 ACTN2P35609 894 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 NPTX2P47972 431 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 CLCN5P51795 746 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 KRT79Q5XKE5 535 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 RINT1Q6NUQ1 792 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 PALB2Q86YC2 1186 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 STAMQ92783 540 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 ACO2Q99798 780 aaKnown RBP16.16■□□□□ 0.18
LMO4-201ENST00000370542 TIPINQ9BVW5 301 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 NAA15Q9BXJ9 866 aaKnown RBP16.16■□□□□ 0.18
LMO4-201ENST00000370542 MRFAP1Q9Y605 127 aa16.16■□□□□ 0.18
LMO4-201ENST00000370542 PP2D1A8MPX8 630 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 POU2F2P09086 479 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 RPL17P18621 184 aaKnown RBP16.15■□□□□ 0.18
LMO4-201ENST00000370542 FGFR3P22607 806 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 GUCY2CP25092 1073 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 MCM3P25205 808 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 HOXA9P31269 272 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 GRM5P41594 1212 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 ATP2C1P98194 919 aaPredicted RBP16.15■□□□□ 0.18
LMO4-201ENST00000370542 CEBPZQ03701 1054 aaKnown RBP16.15■□□□□ 0.18
LMO4-201ENST00000370542 ST3GAL2Q16842 350 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 DPCR1Q3MIW9 517 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 RILPL1Q5EBL4 403 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 PDXDC1Q6P996 788 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 DCLRE1AQ6PJP8 1040 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 PRSS55Q6UWB4 352 aaPredicted RBP16.15■□□□□ 0.18
LMO4-201ENST00000370542 DTHD1Q6ZMT9 781 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 HDXQ7Z353 690 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 KCNK18Q7Z418 384 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 SMG7Q92540 1137 aaKnown RBP16.15■□□□□ 0.18
LMO4-201ENST00000370542 DOCK6Q96HP0 2047 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 MYADMQ96S97 322 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 SEMA4AQ9H3S1 761 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 PPP2R2CQ9Y2T4 447 aa16.15■□□□□ 0.18
LMO4-201ENST00000370542 POLR3GO15318 223 aaPredicted RBP16.14■□□□□ 0.17
LMO4-201ENST00000370542 HIP1RO75146 1068 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 LMNAP02545 664 aaKnown RBP16.14■□□□□ 0.17
LMO4-201ENST00000370542 SPATA31D3P0C874 917 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 NPR3P17342 541 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 IGFBP6P24592 240 aaPredicted RBP16.14■□□□□ 0.17
LMO4-201ENST00000370542 CDC25AP30304 524 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 NDUFA8P51970 172 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms