RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 PYGLP06737 847 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 HARSP12081 509 aaKnown RBP10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 USP4Q13107 963 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 C11orf91Q3C1V1 193 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 ZFYVE27Q5T4F4 411 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 C6orf89Q6UWU4 347 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 ENOSF1Q7L5Y1 443 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 YTHDF3Q7Z739 585 aaKnown RBP10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 MMGT1Q8N4V1 131 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 C3orf20Q8ND61 904 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 LNX1Q8TBB1 728 aaPredicted RBP10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 PIK3R5Q8WYR1 880 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 NENFQ9UMX5 172 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 SNUPNO95149 360 aaKnown RBP10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 INSRRP14616 1297 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 SSR1P43307 286 aaKnown RBP10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 KCNJ2P63252 427 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 IGBP1P78318 339 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 CLDN10P78369 228 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 ADCY2Q08462 1091 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 BIRC3Q13489 604 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 NLRP4Q96MN2 994 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 C1orf112Q9NSG2 853 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 CPA4Q9UI42 421 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 PCDHGC5Q9Y5F6 944 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 A0A0A6YYK5 440 aaPredicted RBP10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 KLHL33A6NCF5 533 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 MSCO60682 206 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 ITGBL1O95965 494 aaPredicted RBP10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 RANBP1P43487 201 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 ACVR2BQ13705 512 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 TMEM132AQ24JP5 1023 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 NBPF20Q3BBV1 942 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 IQSEC1Q6DN90 963 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 CRELD2Q6UXH1 353 aaPredicted RBP10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 FAM71AQ8IYT1 594 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 MGARPQ8TDB4 240 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 CTNNBL1Q8WYA6 563 aaPredicted RBP10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 KAT5Q92993 513 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 ZNF570Q96NI8 536 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 HAPLN2Q9GZV7 340 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 KATNBL1Q9H079 304 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 C15orf41Q9Y2V0 281 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 INO80B-WBP1J3KQ70 363 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 CLCN3P51790 818 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 GALCP54803 685 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 TAF1CQ15572 869 aaPredicted RBP10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 DUSP28Q4G0W2 176 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 ZBTB33Q86T24 672 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 HELQQ8TDG4 1101 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 SHC3Q92529 594 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 KREMEN1Q96MU8 473 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 ACO2Q99798 780 aaKnown RBP10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 SYT11Q9BT88 431 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 INO80BQ9C086 356 aaPredicted RBP10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 DPH5Q9H2P9 285 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 MLXIPLQ9NP71 852 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 TMEM110-MUSTN1A8MSY1 372 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 PIK3CAP42336 1068 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 ZACNQ401N2 412 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 CFAP221Q4G0U5 840 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 LMBRD2Q68DH5 695 aaPredicted RBP10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 C15orf39Q6ZRI6 1047 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 ZNF516Q92618 1163 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 TAF4BQ92750 862 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 CGRRF1Q99675 332 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 ADGRA2Q96PE1 1338 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 EVPLQ92817 2033 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 A0A1B0GVG6 124 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 RAD51CO43502 376 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 C22orf31O95567 290 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 C4BPAP04003 597 aaKnown RBP10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 EDN1P05305 212 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 TMEM253P0C7T8 217 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 FLT3P36888 993 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 HSD17B3P37058 310 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 GCNT1Q02742 428 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 RASAL3Q86YV0 1011 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 OR6J1Q8NGC5 347 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 NPLOC4Q8TAT6 608 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 TATDN2Q93075 761 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 TLR10Q9BXR5 811 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 COL1A2P08123 1366 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 TRPM7Q96QT4 1865 aa10.63□□□□□ -0.71
PRPF38B-203ENST00000370025 A6NNZ2 444 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 HMGB1P1B2RPK0 211 aaPredicted RBP10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 H3BRB1 525 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 ACKR2O00590 384 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 OGTO15294 1046 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 CYP26A1O43174 497 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 HLA-DRAP01903 254 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 SMPD1P17405 629 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 AP3M2P53677 418 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 PTENP60484 403 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 SURF1Q15526 300 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 TUBB8Q3ZCM7 444 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 ERICH1Q86X53 443 aa10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 RPUSD2Q8IZ73 545 aaKnown RBP10.62□□□□□ -0.71
PRPF38B-203ENST00000370025 ARFGAP2Q8N6H7 521 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms