RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 TRIM6Q9C030 488 aaPredicted RBP18.57■□□□□ 0.56
UBE3D-203ENST00000369747 PDE11AQ9HCR9 933 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
UBE3D-203ENST00000369747 EHD2Q9NZN4 543 aa18.57■□□□□ 0.56
UBE3D-203ENST00000369747 A0A0A6YYK5 440 aaPredicted RBP18.56■□□□□ 0.56
UBE3D-203ENST00000369747 CXCL8P10145 99 aa18.56■□□□□ 0.56
UBE3D-203ENST00000369747 DLATP10515 647 aaKnown RBP18.56■□□□□ 0.56
UBE3D-203ENST00000369747 ITGB8P26012 769 aa18.56■□□□□ 0.56
UBE3D-203ENST00000369747 PLA2G4AP47712 749 aa18.56■□□□□ 0.56
UBE3D-203ENST00000369747 DCAF4L1Q3SXM0 396 aa18.56■□□□□ 0.56
UBE3D-203ENST00000369747 LRRC57Q8N9N7 239 aa18.56■□□□□ 0.56
UBE3D-203ENST00000369747 SEMA4DQ92854 862 aa18.56■□□□□ 0.56
UBE3D-203ENST00000369747 ABCB6Q9NP58 842 aa18.56■□□□□ 0.56
UBE3D-203ENST00000369747 TOPORSQ9NS56 1045 aaPredicted RBP18.56■□□□□ 0.56
UBE3D-203ENST00000369747 SMARCAL1Q9NZC9 954 aa18.56■□□□□ 0.56
UBE3D-203ENST00000369747 COQ4Q9Y3A0 265 aa18.56■□□□□ 0.56
UBE3D-203ENST00000369747 TRIM43BA6NCK2 446 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 GALCP54803 685 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 KRT39Q6A163 491 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 MMGT1Q8N4V1 131 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 SPATA4Q8NEY3 305 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 KAT5Q92993 513 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 TRIM43Q96BQ3 446 aaPredicted RBP18.55■□□□□ 0.56
UBE3D-203ENST00000369747 FAM212AQ96EL1 285 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 RNF39Q9H2S5 420 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 TMEM8AQ9HCN3 771 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 PRDM5Q9NQX1 630 aaPredicted RBP18.55■□□□□ 0.56
UBE3D-203ENST00000369747 CHST12Q9NRB3 414 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 SNTG2Q9NY99 539 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 PACSIN2Q9UNF0 486 aaPredicted RBP18.55■□□□□ 0.56
UBE3D-203ENST00000369747 TANC1Q9C0D5 1861 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 PTPRJQ12913 1337 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 TARSL2A2RTX5 802 aaKnown RBP18.55■□□□□ 0.56
UBE3D-203ENST00000369747 ERLIN1O75477 346 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 IFI16Q16666 785 aaKnown RBP18.55■□□□□ 0.56
UBE3D-203ENST00000369747 LMBRD2Q68DH5 695 aaPredicted RBP18.55■□□□□ 0.56
UBE3D-203ENST00000369747 BRSK2Q8IWQ3 736 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 SMG8Q8ND04 991 aaKnown RBP18.55■□□□□ 0.56
UBE3D-203ENST00000369747 TPCN2Q8NHX9 752 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 ADAM2Q99965 735 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 APOL6Q9BWW8 343 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 CXCL16Q9H2A7 254 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 IPPQ9Y573 584 aa18.55■□□□□ 0.56
UBE3D-203ENST00000369747 CLTAP09496 248 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 AKAP5P24588 427 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 GRM5P41594 1212 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 NOP2P46087 812 aaKnown RBP18.54■□□□□ 0.56
UBE3D-203ENST00000369747 DSC3Q14574 896 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 PSMD6Q15008 389 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 SLC10A6Q3KNW5 377 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 CCDC181Q5TID7 509 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 PALB2Q86YC2 1186 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 DBF4BQ8NFT6 615 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 ABHD8Q96I13 439 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 MS4A14Q96JA4 679 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 KREMEN1Q96MU8 473 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 AGPAT1Q99943 283 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 FAM105AQ9NUU6 356 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 PCDHB2Q9Y5E7 798 aa18.54■□□□□ 0.56
UBE3D-203ENST00000369747 ALPK3Q96L96 1907 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 NCANO14594 1321 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 ANK1P16157 1881 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 MEIS3P2A8K0S8 358 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 TNFAIP3P21580 790 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 GTF2H1P32780 548 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 ENPEPQ07075 957 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 PLEKHG4Q58EX7 1191 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 RTN4RL1Q86UN2 441 aaPredicted RBP18.53■□□□□ 0.56
UBE3D-203ENST00000369747 SLC20A1Q8WUM9 679 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 ACAP3Q96P50 834 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 GOLPH3Q9H4A6 298 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 RPF1Q9H9Y2 349 aaKnown RBP18.53■□□□□ 0.56
UBE3D-203ENST00000369747 RANBP2P49792 3224 aaKnown RBP18.53■□□□□ 0.56
UBE3D-203ENST00000369747 TMCO5BA8MYB1 307 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 MAP2K7O14733 419 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 PAFAH1B1P43034 410 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 TCTN1Q2MV58 587 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 APBB1IPQ7Z5R6 666 aaPredicted RBP18.53■□□□□ 0.56
UBE3D-203ENST00000369747 DEFB128Q7Z7B8 93 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 TAS1R2Q8TE23 839 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 LINC01599Q8WXQ3 324 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 ZNF516Q92618 1163 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 FNBP1Q96RU3 617 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.53■□□□□ 0.564e-6■■■■■ 111.8
UBE3D-203ENST00000369747 RNF19AQ9NV58 838 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 TAS2R14Q9NYV8 317 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 RNF14Q9UBS8 474 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 L1RE1Q9UN81 338 aa18.53■□□□□ 0.56
UBE3D-203ENST00000369747 CITO14578 2027 aa18.52■□□□□ 0.56
UBE3D-203ENST00000369747 TRIP11Q15643 1979 aa18.52■□□□□ 0.56
UBE3D-203ENST00000369747 TMEM253P0C7T8 217 aa18.52■□□□□ 0.56
UBE3D-203ENST00000369747 TNNI1P19237 187 aa18.52■□□□□ 0.56
UBE3D-203ENST00000369747 IBSPP21815 317 aaPredicted RBP18.52■□□□□ 0.56
UBE3D-203ENST00000369747 DNA2P51530 1060 aa18.52■□□□□ 0.56
UBE3D-203ENST00000369747 CLDN10P78369 228 aa18.52■□□□□ 0.56
UBE3D-203ENST00000369747 SLFN11Q7Z7L1 901 aa18.52■□□□□ 0.56
UBE3D-203ENST00000369747 USP37Q86T82 979 aa18.52■□□□□ 0.56
UBE3D-203ENST00000369747 FAM71AQ8IYT1 594 aa18.52■□□□□ 0.56
UBE3D-203ENST00000369747 FBXL13Q8NEE6 735 aa18.52■□□□□ 0.56
UBE3D-203ENST00000369747 HELQQ8TDG4 1101 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms