RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ZBP1Q9H171 429 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 TMEM39AQ9NV64 488 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 TUBE1Q9UJT0 475 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 PADI3Q9ULW8 664 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 SRPRBQ9Y5M8 271 aaKnown RBP7.38□□□□□ -1.23
CSDE1-204ENST00000369530 DCDC2CA8MYV0 355 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 GNAT1P11488 350 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 PHKA2P46019 1235 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 GTF2BQ00403 316 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 KIF5AQ12840 1032 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 Q7L0L9 218 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 MAATS1Q7Z4T9 603 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 ECHDC2Q86YB7 292 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-204ENST00000369530 AP5M1Q9H0R1 490 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 LMAN2LQ9H0V9 348 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 PDZD7Q9H5P4 517 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 AVENQ9NQS1 362 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-204ENST00000369530 CNTN3Q9P232 1028 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 ATXN10Q9UBB4 475 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 SEC63Q9UGP8 760 aaKnown RBP7.38□□□□□ -1.23
CSDE1-204ENST00000369530 ATP11BQ9Y2G3 1177 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 NDUFAB1O14561 156 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 PPP6R2O75170 966 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC166P0CW27 439 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 KLRC1P26715 233 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 LSP1P33241 339 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 TRPC1P48995 793 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 NDUFA8P51970 172 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 FANCCQ00597 558 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 HSP90AA4PQ58FG1 418 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 C15orf39Q6ZRI6 1047 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 FMR1NBQ8N0W7 255 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-204ENST00000369530 TC2NQ8N9U0 490 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 MYCBPAPQ8TBZ2 947 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 SPPL3Q8TCT6 385 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 IRGQQ8WZA9 623 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 SAMD11Q96NU1 681 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 RAD9AQ99638 391 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 FGFBP2Q9BYJ0 223 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 MIOSQ9NXC5 875 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 SPATA7Q9P0W8 599 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-204ENST00000369530 SLC4A7Q9Y6M7 1214 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 CTAGE15A4D2H0 777 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 CFAP73A6NFT4 308 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 PSAPP07602 524 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 MYL3P08590 195 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 CTAGE8P0CG41 777 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 ADSSP30520 456 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 RANBP1P43487 201 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 NLRP12P59046 1061 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC15Q0P6D6 951 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 BFSP2Q13515 415 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 BYSLQ13895 437 aaKnown RBP7.37□□□□□ -1.23
CSDE1-204ENST00000369530 ZNF174Q15697 407 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 ZCWPW2Q504Y3 356 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 C1orf220Q5T0J3 134 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 KIAA0319Q5VV43 1072 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 SHC4Q6S5L8 630 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 CCNI2Q6ZMN8 369 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-204ENST00000369530 CTAGE6Q86UF2 777 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 TMEM173Q86WV6 379 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-204ENST00000369530 CTAGE4Q8IX94 777 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 LINC00301Q8NCQ3 95 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 TMEM161BQ8NDZ6 487 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 DBF4BQ8NFT6 615 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 KHSRPQ92945 711 aaKnown RBP eCLIP7.37□□□□□ -1.232e-7■■■■□ 20
CSDE1-204ENST00000369530 DUSP9Q99956 384 aaKnown RBP7.37□□□□□ -1.23
CSDE1-204ENST00000369530 SLC12A4Q9UP95 1085 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 NR2E3Q9Y5X4 410 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 ANO9A1A5B4 782 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 ACTN4O43707 911 aaKnown RBP7.37□□□□□ -1.23
CSDE1-204ENST00000369530 FGBP02675 491 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 ACRP10323 421 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 KCNE1P15382 129 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 YWHABP31946 246 aaKnown RBP7.37□□□□□ -1.23
CSDE1-204ENST00000369530 SCTRP47872 440 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 ADAM15Q13444 863 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 LEXMQ3ZCV2 418 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC181Q5TID7 509 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 SLC39A11Q8N1S5 342 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 DNAJB3Q8WWF6 145 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 CCT6BQ92526 530 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 FTHL17Q9BXU8 183 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 DMAC2Q9NW81 257 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 TMEM161AQ9NX61 479 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 NOP53Q9NZM5 478 aaKnown RBP7.37□□□□□ -1.23
CSDE1-204ENST00000369530 LRRC42Q9Y546 428 aa7.37□□□□□ -1.23
CSDE1-204ENST00000369530 RSPH10B2B2RC85 870 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 E7ENQ6 273 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 MAGEB2O15479 319 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 RSPH10BP0C881 870 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 NAT1P18440 290 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 WEE1P30291 646 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 QARSP47897 775 aaKnown RBP7.36□□□□□ -1.23
CSDE1-204ENST00000369530 GLE1Q53GS7 698 aaKnown RBP7.36□□□□□ -1.23
CSDE1-204ENST00000369530 ARMC3Q5W041 872 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 ADALQ6DHV7 355 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 SWSAP1Q6NVH7 229 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms