RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ALCAMQ13740 583 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 CTC1Q2NKJ3 1217 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 TAF1BQ53T94 588 aaPredicted RBP18.46■□□□□ 0.55
CHTOP-203ENST00000368690 ZNF449Q6P9G9 518 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 SHC3Q92529 594 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 FAM81BQ96LP2 452 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 SMC6Q96SB8 1091 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 SYT17Q9BSW7 474 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 AMNQ9BXJ7 453 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 DNAJC17Q9NVM6 304 aaKnown RBP18.46■□□□□ 0.55
CHTOP-203ENST00000368690 DLGAP2Q9P1A6 1054 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 PI4KBQ9UBF8 816 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.46■□□□□ 0.55
CHTOP-203ENST00000368690 ATRNL1Q5VV63 1379 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 EXOC1LA0A1B0GW35 172 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 RRM1P23921 792 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 PPP3CAQ08209 521 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 PPP2R5CQ13362 524 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 ODR4Q5SWX8 454 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 FYB2Q5VWT5 728 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 IZUMO3Q5VZ72 239 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 ACAD10Q6JQN1 1059 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 ZNF365Q70YC5 407 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 NLRP9Q7RTR0 991 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 CLNKQ7Z7G1 428 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 MKL1Q969V6 931 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 CCDC17Q96LX7 622 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 MMADHCQ9H3L0 296 aaPredicted RBP18.45■□□□□ 0.54
CHTOP-203ENST00000368690 KIAA1586Q9HCI6 787 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 MYOZ2Q9NPC6 264 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 SLCO1B3Q9NPD5 702 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 ZNF70Q9UC06 446 aaPredicted RBP18.45■□□□□ 0.54
CHTOP-203ENST00000368690 CHORDC1Q9UHD1 332 aaPredicted RBP18.45■□□□□ 0.54
CHTOP-203ENST00000368690 MFAP3P55082 362 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 KLF1Q13351 362 aaPredicted RBP18.45■□□□□ 0.54
CHTOP-203ENST00000368690 ZC3H12AQ5D1E8 599 aaKnown RBP18.45■□□□□ 0.54
CHTOP-203ENST00000368690 KSR1Q8IVT5 923 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 SYCP3Q8IZU3 236 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 ATG4AQ8WYN0 398 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 CSRNP1Q96S65 589 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 CCDC28BQ9BUN5 200 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 TIPINQ9BVW5 301 aa18.45■□□□□ 0.54
CHTOP-203ENST00000368690 AVENQ9NQS1 362 aaPredicted RBP18.45■□□□□ 0.54
CHTOP-203ENST00000368690 H0Y3Z8 333 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 ZBED4O75132 1171 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 MAPTP10636 758 aaKnown RBP18.44■□□□□ 0.54
CHTOP-203ENST00000368690 CCDC6Q16204 474 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 GSTA3Q16772 222 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 PPP1R15BQ5SWA1 713 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 SNX30Q5VWJ9 437 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 SH3BP5LQ7L8J4 393 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 OTOP1Q7RTM1 612 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 C9orf72Q96LT7 481 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 NACC1Q96RE7 527 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 RBM15Q96T37 977 aaKnown RBP eCLIP18.44■□□□□ 0.541e-6■■■■□ 23.8
CHTOP-203ENST00000368690 BTBD10Q9BSF8 475 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 TMEM206Q9H813 350 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 GSTTP1A0A1W2PQM5 241 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 MAGEA13PA6NCF6 341 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 EIF4E1BA6NMX2 242 aaKnown RBP18.44■□□□□ 0.54
CHTOP-203ENST00000368690 TYROBPO43914 113 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 TROVE2P10155 538 aaKnown RBP eCLIP18.44■□□□□ 0.54
CHTOP-203ENST00000368690 MAPK4P31152 587 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 RFC5P40937 340 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 GMPSP49915 693 aaPredicted RBP18.44■□□□□ 0.54
CHTOP-203ENST00000368690 DLG4P78352 724 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 DYNC1I2Q13409 638 aaKnown RBP18.44■□□□□ 0.54
CHTOP-203ENST00000368690 CCDC142Q17RM4 750 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 KHDC1Q4VXA5 237 aaKnown RBP18.44■□□□□ 0.54
CHTOP-203ENST00000368690 OTOAQ7RTW8 1153 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 SPOCK2Q92563 424 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 TRIM4Q9C037 500 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 PDP2Q9P2J9 529 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 SLC24A2Q9UI40 661 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 GRID1Q9ULK0 1009 aa18.44■□□□□ 0.54
CHTOP-203ENST00000368690 SCAF8Q9UPN6 1271 aaKnown RBP18.44■□□□□ 0.54
CHTOP-203ENST00000368690 ZNFX1Q9P2E3 1918 aaKnown RBP18.43■□□□□ 0.54
CHTOP-203ENST00000368690 RBBP6Q7Z6E9 1792 aaKnown RBP18.43■□□□□ 0.54
CHTOP-203ENST00000368690 FAM170AA1A519 330 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 F5H6K3 240 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 FZD9O00144 591 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 CYP26A1O43174 497 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 ENTPD3O75355 529 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 SPAG7O75391 227 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 CYP11B1P15538 503 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 KLRC2P26717 231 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 ADSSP30520 456 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 SNRPFP62306 86 aaKnown RBP18.43■□□□□ 0.54
CHTOP-203ENST00000368690 SLC34A1Q06495 639 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 TRIP13Q15645 432 aaPredicted RBP18.43■□□□□ 0.54
CHTOP-203ENST00000368690 C1orf220Q5T0J3 134 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 SLC47A2Q86VL8 602 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 TPH2Q8IWU9 490 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 MICALL2Q8IY33 904 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 DDX27Q96GQ7 796 aaKnown RBP18.43■□□□□ 0.54
CHTOP-203ENST00000368690 DYDC2Q96IM9 177 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 MIPEPQ99797 713 aa18.43■□□□□ 0.54
CHTOP-203ENST00000368690 CADM1Q9BY67 442 aaKnown RBP18.43■□□□□ 0.54
CHTOP-203ENST00000368690 STX18Q9P2W9 335 aaKnown RBP18.43■□□□□ 0.54
CHTOP-203ENST00000368690 IGLV3-22A0A075B6J6 115 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms