RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 IL23AQ9NPF7 189 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 MIOSQ9NXC5 875 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 NXF1Q9UBU9 619 aaKnown RBP13.2□□□□□ -0.3
TUBE1-202ENST00000368662 ZKSCAN5Q9Y2L8 839 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 TTC3P53804 2025 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 EVI5O60447 810 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 POMCP01189 267 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 ANXA13P27216 316 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 ASPAP45381 313 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 BPIFB4P59827 614 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 TDRD12Q587J7 1177 aaKnown RBP13.19□□□□□ -0.3
TUBE1-202ENST00000368662 CLLU1OSQ5K130 101 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 IRF2BP2Q7Z5L9 587 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 ABHD8Q96I13 439 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 CCDC42Q96M95 316 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 BCO2Q9BYV7 579 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 GOLGA2P5Q9HBQ8 144 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 RNF19AQ9NV58 838 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 GFPT2O94808 682 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 AMHP03971 560 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 FGFR1P11362 822 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 CYLC1P35663 651 aaPredicted RBP13.19□□□□□ -0.3
TUBE1-202ENST00000368662 USP8P40818 1118 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 AFF1P51825 1210 aaKnown RBP13.19□□□□□ -0.3
TUBE1-202ENST00000368662 ARID5AQ03989 594 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
TUBE1-202ENST00000368662 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
TUBE1-202ENST00000368662 HGSNATQ68CP4 663 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 SCARA3Q6AZY7 606 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 VPS36Q86VN1 386 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 VWCEQ96DN2 955 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 ARID3AQ99856 593 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 DEF6Q9H4E7 631 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 NHEJ1Q9H9Q4 299 aaPredicted RBP13.19□□□□□ -0.3
TUBE1-202ENST00000368662 GDAP2Q9NXN4 497 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 CNTN6Q9UQ52 1028 aa13.19□□□□□ -0.3
TUBE1-202ENST00000368662 MICAL3Q7RTP6 2002 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 KPNA7A9QM74 516 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 RBAK-RBAKDNI3L0D1 243 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 PODXLO00592 558 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 KRT5P13647 590 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 RNASELQ05823 741 aaKnown RBP13.18□□□□□ -0.3
TUBE1-202ENST00000368662 FPGSQ05932 587 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 UPP1Q16831 310 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 ELMO3Q96BJ8 720 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 FAM193BQ96PV7 902 aaPredicted RBP13.18□□□□□ -0.3
TUBE1-202ENST00000368662 MMS19Q96T76 1030 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 CHP1Q99653 195 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 CISHQ9NSE2 258 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 ARHGAP20Q9P2F6 1191 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 SOWAHDA6NJG2 315 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 IPO7O95373 1038 aaKnown RBP13.18□□□□□ -0.3
TUBE1-202ENST00000368662 ACO1P21399 889 aaKnown RBP13.18□□□□□ -0.3
TUBE1-202ENST00000368662 PDE6CP51160 858 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 LILRA4P59901 499 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 DPH6Q7L8W6 267 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 ZSCAN30Q86W11 494 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 C7orf61Q8IZ16 206 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 HAUS4Q9H6D7 363 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 TBC1D13Q9NVG8 400 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 PCDHB4Q9Y5E5 795 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 SNX9Q9Y5X1 595 aa13.18□□□□□ -0.3
TUBE1-202ENST00000368662 CASTOR2A6NHX0 329 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 PPEF2O14830 753 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 FAM163BP0C2L3 166 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 PNMA6AP0CW24 399 aaPredicted RBP13.17□□□□□ -0.3
TUBE1-202ENST00000368662 CLCNKBP51801 687 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 PTK2Q05397 1052 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 DSC1Q08554 894 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
TUBE1-202ENST00000368662 TMEM270Q6UE05 265 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 SCARA5Q6ZMJ2 495 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 ZNF677Q86XU0 584 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 UBR7Q8N806 425 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 TOP1MTQ969P6 601 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 CASD1Q96PB1 797 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 DNAI2Q9GZS0 605 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 POLIQ9UNA4 740 aa13.17□□□□□ -0.3
TUBE1-202ENST00000368662 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
TUBE1-202ENST00000368662 ARHGEF37A1IGU5 675 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 CYP26A1O43174 497 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 HUS1O60921 280 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 NDUFA10O95299 355 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 WEE2P0C1S8 567 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 MSNP26038 577 aaKnown RBP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 CLCN1P35523 988 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 INCA1Q0VD86 236 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 PSRC1Q6PGN9 363 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 DCLRE1AQ6PJP8 1040 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 LRRC43Q8N309 656 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 TMEM130Q8N3G9 435 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 TOP6BLQ8N6T0 577 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 APPL2Q8NEU8 664 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 BADQ92934 168 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 EPN1Q9Y6I3 576 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 ALPK3Q96L96 1907 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 CCP110O43303 1012 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms