RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TGFB1I1O43294 461 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 EXTL3O43909 919 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 POU2F2P09086 479 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 CTXN3Q4LDR2 81 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 PPM1LQ5SGD2 360 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 ZNF280DQ6N043 979 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 ARMCX5Q6P1M9 558 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 RTL10Q7L3V2 364 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 OTOP3Q7RTS5 596 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 NT5DC4Q86YG4 428 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 CEP57L1Q8IYX8 460 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 LIMD1Q9UGP4 676 aa20.52■□□□□ 0.88
CKS1B-203ENST00000368439 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.51■□□□□ 0.87
CKS1B-203ENST00000368439 ASGR2P07307 311 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 ATF2P15336 505 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 TYMPP19971 482 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 COL9A1P20849 921 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 NDUFA8P51970 172 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 BMT2Q1RMZ1 405 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 SCARA3Q6AZY7 606 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 DSTYKQ6XUX3 929 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 TRIM67Q6ZTA4 783 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 GPD1LQ8N335 351 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 CXorf38Q8TB03 319 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 ACSF2Q96CM8 615 aaPredicted RBP20.51■□□□□ 0.87
CKS1B-203ENST00000368439 BORCS6Q96GS4 357 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 MYADMQ96S97 322 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 PIDD1Q9HB75 910 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 RBAKQ9NYW8 714 aaPredicted RBP20.51■□□□□ 0.87
CKS1B-203ENST00000368439 USP25Q9UHP3 1055 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 UBE4BO95155 1302 aa20.51■□□□□ 0.87
CKS1B-203ENST00000368439 A0A1W2PQ27 194 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 A0A1W2PQ64 194 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 A0A1W2PQD8 194 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 ARHGEF37A1IGU5 675 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 KIAA0391O15091 583 aaKnown RBP20.5■□□□□ 0.87
CKS1B-203ENST00000368439 CCL16O15467 120 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 SEC24AO95486 1093 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 PAX3P23760 479 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 YWHAHQ04917 246 aaPredicted RBP20.5■□□□□ 0.87
CKS1B-203ENST00000368439 GRASPQ7Z6J2 395 aaPredicted RBP20.5■□□□□ 0.87
CKS1B-203ENST00000368439 TCEAL8Q8IYN2 117 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 FAM84AQ96KN4 292 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 SENP8Q96LD8 212 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 GOLPH3LQ9H4A5 285 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 GDPD2Q9HCC8 539 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 PDE11AQ9HCR9 933 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 SLC39A2Q9NP94 309 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 RAPGEFL1Q9UHV5 662 aa20.5■□□□□ 0.87
CKS1B-203ENST00000368439 VNN2O95498 520 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 CYP11A1P05108 521 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 ARPP19P56211 112 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 NTHL1P78549 312 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 SIGLEC14Q08ET2 396 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 TPGS2Q68CL5 300 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 C1orf127Q8N9H9 656 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 ASIC4Q96FT7 647 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 SMOC2Q9H3U7 446 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 AGPAT3Q9NRZ7 376 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 HSPBP1Q9NZL4 362 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 EPS15L1Q9UBC2 864 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 SORCS3Q9UPU3 1222 aa20.49■□□□□ 0.87
CKS1B-203ENST00000368439 SYKP43405 635 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 TAF6P49848 677 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 STK4Q13043 487 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 RNF19BQ6ZMZ0 732 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 HFE2Q6ZVN8 426 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 CBWD2Q8IUF1 395 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 NELFCDQ8IXH7 590 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 KIAA0895Q8NCT3 520 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 OXCT2Q9BYC2 517 aaPredicted RBP20.48■□□□□ 0.87
CKS1B-203ENST00000368439 HCFC1R1Q9NWW0 138 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 DNMT3BQ9UBC3 853 aaKnown RBP20.48■□□□□ 0.87
CKS1B-203ENST00000368439 AFF4Q9UHB7 1163 aaKnown RBP20.48■□□□□ 0.87
CKS1B-203ENST00000368439 ZNF318Q5VUA4 2279 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 PTPRJQ12913 1337 aa20.48■□□□□ 0.87
CKS1B-203ENST00000368439 TMEM221A6NGB7 291 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 M0R296 226 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 XYLBO75191 536 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 MYL1P05976 194 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 OR4Q2P0C623 313 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 GBP2P32456 591 aaPredicted RBP20.47■□□□□ 0.87
CKS1B-203ENST00000368439 SNRPFP62306 86 aaKnown RBP20.47■□□□□ 0.87
CKS1B-203ENST00000368439 NUCB2P80303 420 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 TFAMQ00059 246 aaKnown RBP20.47■□□□□ 0.87
CKS1B-203ENST00000368439 MTMR3Q13615 1198 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 KMT5BQ4FZB7 885 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 OVOS1Q6IE37 1185 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 BMP8AQ7Z5Y6 402 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 FSIP1Q8NA03 581 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 RTP3Q9BQQ7 232 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 KCNK12Q9HB15 430 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.47■□□□□ 0.87
CKS1B-203ENST00000368439 MAFFQ9ULX9 164 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 INSL5Q9Y5Q6 135 aa20.47■□□□□ 0.87
CKS1B-203ENST00000368439 ZNF233A6NK53 670 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 OR6C75A6NL08 312 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 CLIC2O15247 247 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 PRR29P0C7W0 189 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 ODC1P11926 461 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms