RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 MRPL43Q8N983 215 aaKnown RBP13.64□□□□□ -0.23
EFNA1-201ENST00000368406 HASPINQ8TF76 798 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 BCL7CQ8WUZ0 217 aaPredicted RBP13.64□□□□□ -0.23
EFNA1-201ENST00000368406 RABGGTAQ92696 567 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 HLA-CQ95604 372 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 SLC35C1Q96A29 364 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 DDX27Q96GQ7 796 aaKnown RBP13.64□□□□□ -0.23
EFNA1-201ENST00000368406 BORCS6Q96GS4 357 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 TCF25Q9BQ70 676 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 VPS16Q9H269 839 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 NUB1Q9Y5A7 615 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 IRAK3Q9Y616 596 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 SPTBN5Q9NRC6 3674 aaKnown RBP13.63□□□□□ -0.23
EFNA1-201ENST00000368406 BRWD1Q9NSI6 2320 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.63□□□□□ -0.23
EFNA1-201ENST00000368406 FSD2A1L4K1 749 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 ATP1A3P13637 1013 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 RPL9P32969 192 aaKnown RBP13.63□□□□□ -0.23
EFNA1-201ENST00000368406 FMO5P49326 533 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 RBP5P82980 135 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 PPP3CAQ08209 521 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 KCNH2Q12809 1159 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 SMC1AQ14683 1233 aaKnown RBP13.63□□□□□ -0.23
EFNA1-201ENST00000368406 CTC1Q2NKJ3 1217 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 VWA3BQ502W6 1294 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 FKBP15Q5T1M5 1219 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 TDRD10Q5VZ19 366 aaKnown RBP13.63□□□□□ -0.23
EFNA1-201ENST00000368406 TMC7Q7Z402 723 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.63□□□□□ -0.23
EFNA1-201ENST00000368406 C1orf127Q8N9H9 656 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 ATXN2LQ8WWM7 1075 aaKnown RBP13.63□□□□□ -0.23
EFNA1-201ENST00000368406 PABPC5Q96DU9 382 aaKnown RBP13.63□□□□□ -0.23
EFNA1-201ENST00000368406 CDCA3Q99618 268 aaPredicted RBP13.63□□□□□ -0.23
EFNA1-201ENST00000368406 ZBP1Q9H171 429 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 ENTPD7Q9NQZ7 604 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 MARCH5Q9NX47 278 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 VCANP13611 3396 aa13.63□□□□□ -0.23
EFNA1-201ENST00000368406 TADA2AO75478 443 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 B3GAT3O94766 335 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 CTSAP10619 480 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 ZNF18P17022 549 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 LRPAP1P30533 357 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 PNPLA4P41247 253 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 COPB1P53618 953 aaKnown RBP13.62□□□□□ -0.23
EFNA1-201ENST00000368406 CLDN10P78369 228 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 HYAL1Q12794 435 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 NCOA4Q13772 614 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 ZBTB6Q15916 424 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 ZNF699Q32M78 642 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 SV2CQ496J9 727 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 C1orf220Q5T0J3 134 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 C9orf57Q5W0N0 161 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 SV2AQ7L0J3 742 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 GPR65Q8IYL9 337 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 RNF168Q8IYW5 571 aaPredicted RBP13.62□□□□□ -0.23
EFNA1-201ENST00000368406 TMEM130Q8N3G9 435 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 ZNF516Q92618 1163 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 PCMTD1Q96MG8 357 aaPredicted RBP13.62□□□□□ -0.23
EFNA1-201ENST00000368406 VN1R3Q9BXE9 311 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 NDST4Q9H3R1 872 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 TLE6Q9H808 572 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 THEGQ9P2T0 379 aa13.62□□□□□ -0.23
EFNA1-201ENST00000368406 LIMA1Q9UHB6 759 aaKnown RBP13.62□□□□□ -0.23
EFNA1-201ENST00000368406 C2orf71A6NGG8 1288 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 TMEM189-UBE2V1I3L0A0 370 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 KIF4AO95239 1232 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 CXCL14O95715 111 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 HLA-DRAP01903 254 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 SOD2P04179 222 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 TPM3P06753 285 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 CA8P35219 290 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 TAF6P49848 677 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 UPP1Q16831 310 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 AAK1Q2M2I8 961 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 ZACNQ401N2 412 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 CBWD6Q4V339 395 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 WDR44Q5JSH3 913 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 CBWD3Q5JTY5 395 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 CBWD5Q5RIA9 395 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 PLPP4Q5VZY2 271 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 DCLRE1AQ6PJP8 1040 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 DSTYKQ6XUX3 929 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 ADGRD2Q7Z7M1 963 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 EFHBQ8N7U6 833 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 FBXL13Q8NEE6 735 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 PAAF1Q9BRP4 392 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 RBSNQ9H1K0 784 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 PRDM6Q9NQX0 595 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.61□□□□□ -0.23
EFNA1-201ENST00000368406 GCNT4Q9P109 453 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 ADAM28Q9UKQ2 775 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 SSX2IPQ9Y2D8 614 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 PCDHGC5Q9Y5F6 944 aa13.61□□□□□ -0.23
EFNA1-201ENST00000368406 SF3B1O75533 1304 aaKnown RBP eCLIP13.6□□□□□ -0.23
EFNA1-201ENST00000368406 HIDE1A8MVS5 230 aa13.6□□□□□ -0.23
EFNA1-201ENST00000368406 PPEF2O14830 753 aa13.6□□□□□ -0.23
EFNA1-201ENST00000368406 TRAPPC3O43617 180 aa13.6□□□□□ -0.23
EFNA1-201ENST00000368406 CSPG5O95196 566 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms