RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 CD4P01730 458 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 ICAM1P05362 532 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 SPDYAQ5MJ70 313 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 NOTUMQ6P988 496 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 C3orf67Q6ZVT6 689 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 AGBL3Q8NEM8 1001 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 LZICQ8WZA0 190 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 CCDC124Q96CT7 223 aaKnown RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 POP1Q99575 1024 aaKnown RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 KLF6Q99612 283 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 A0A1B0GTH6 734 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 MED24O75448 989 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 RPS12P25398 132 aaKnown RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 C4orf33Q8N1A6 199 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 SH3TC2Q8TF17 1288 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 FAM161BQ96MY7 647 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 DDX50Q9BQ39 737 aaKnown RBP13.55□□□□□ -0.24
PTPRK-207ENST00000368226 RRAGCQ9HB90 399 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 KIF17Q9P2E2 1029 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 IGSF9BQ9UPX0 1349 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 GTF2A2P52657 109 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 GUCY1A3Q02108 690 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 ASAP3Q8TDY4 903 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 EXOC4Q96A65 974 aa13.55□□□□□ -0.24
PTPRK-207ENST00000368226 COMTP21964 271 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 RNF180Q86T96 592 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 TRIM54Q9BYV2 358 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 CELF4Q9BZC1 486 aaKnown RBP13.54□□□□□ -0.24
PTPRK-207ENST00000368226 DPP3Q9NY33 737 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 ENDOD1O94919 500 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 MTMR12Q9C0I1 747 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 PCMTD2Q9NV79 361 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 TBX20Q9UMR3 447 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 CEP170BQ9Y4F5 1589 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-207ENST00000368226 SETBP1Q9Y6X0 1596 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 ATL2Q8NHH9 583 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 GLT1D1Q96MS3 346 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 KCNF1Q9H3M0 494 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 MRPL42Q9Y6G3 142 aaKnown RBP13.54□□□□□ -0.24
PTPRK-207ENST00000368226 ADGRA2Q96PE1 1338 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 FAM187AA6NFU0 413 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 RPA1P27694 616 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 SLC1A1P43005 524 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 KCNJ1P48048 391 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 PPP3CCP48454 512 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 ESRRGP62508 458 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 VSNL1P62760 191 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 CUL3Q13618 768 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 LAMC2Q13753 1193 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 FAXCQ5TGI0 409 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 LRRC8EQ6NSJ5 796 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 CHSY1Q86X52 802 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 MFN1Q8IWA4 741 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 HS6ST3Q8IZP7 471 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 OPTNQ96CV9 577 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 TRIM62Q9BVG3 475 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 TMEM8AQ9HCN3 771 aa13.54□□□□□ -0.24
PTPRK-207ENST00000368226 NFIBO00712 420 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 IL18RAPO95256 599 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 ALDH1A3P47895 512 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 DEFB128Q7Z7B8 93 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 TADA2BQ86TJ2 420 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 ZSCAN9O15535 394 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 MEFVO15553 781 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 SETSIPP0DME0 302 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 MAP1SQ66K74 1059 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 SH2D3CQ8N5H7 860 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 PTPRN2Q92932 1015 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 ERLEC1Q96DZ1 483 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 SLC38A7Q9NVC3 462 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 SENP1Q9P0U3 644 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 ADAM21Q9UKJ8 722 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 TRIM33Q9UPN9 1127 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 MORC4Q8TE76 937 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 TEKT4Q8WW24 435 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 APOL5Q9BWW9 433 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 CCDC90BQ9GZT6 254 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 ECT2Q9H8V3 914 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 LATS2Q9NRM7 1088 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 PRMT7Q9NVM4 692 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 ARHGEF38Q9NXL2 777 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 ZC3H11AO75152 810 aaKnown RBP eCLIP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 PLEKP08567 350 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 MAP4P27816 1152 aaKnown RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 POLE2P56282 527 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 GTF2H3Q13889 308 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 RIT2Q99578 217 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 C20orf96Q9NUD7 363 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 ZC3H7BQ9UGR2 993 aaKnown RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 SNX12Q9UMY4 172 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 DOLKQ9UPQ8 538 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 GPD1P21695 349 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 ALDH7A1P49419 539 aaKnown RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 CCDC157Q569K6 752 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 PPP1R13LQ8WUF5 828 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 CALR3Q96L12 384 aaKnown RBP13.53□□□□□ -0.24
PTPRK-207ENST00000368226 LRRC37BQ96QE4 947 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 KCNQ5Q9NR82 932 aa13.53□□□□□ -0.24
PTPRK-207ENST00000368226 CDC42EP1Q00587 391 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms