RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 DCLK3Q9C098 648 aa11.67□□□□□ -0.54
NECTIN4-201ENST00000368012 DLGAP2Q9P1A6 1054 aa11.67□□□□□ -0.54
NECTIN4-201ENST00000368012 CNOT7Q9UIV1 285 aaKnown RBP11.67□□□□□ -0.54
NECTIN4-201ENST00000368012 GGA2Q9UJY4 613 aa11.67□□□□□ -0.54
NECTIN4-201ENST00000368012 CHMP2BQ9UQN3 213 aa11.67□□□□□ -0.54
NECTIN4-201ENST00000368012 MT-ND3P03897 115 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 ZBTB48P10074 688 aaPredicted RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 ESRRAP11474 423 aaPredicted RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 ADRA1DP25100 572 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 ANXA13P27216 316 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 CALRP27797 417 aaKnown RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 NPTX2P47972 431 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 TRPC3Q13507 836 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 PRAMEF18Q5VWM3 479 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 CASC4Q6P4E1 433 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 PPFIBP2Q8ND30 876 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 ZNF483Q8TF39 744 aaPredicted RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 ROPN1BQ9BZX4 212 aaPredicted RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 ROPN1Q9HAT0 212 aaPredicted RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 NKX1-2Q9UD57 310 aaPredicted RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 GINS2Q9Y248 185 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 IGLV3-22A0A075B6J6 115 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 H0YIN7 160 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 SRGAP2CP0DJJ0 459 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 TCF4P15884 667 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 MARK3P27448 753 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 TRAF1Q13077 416 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 FOXR2Q6PJQ5 311 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 RFX6Q8HWS3 928 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 UVRAGQ9P2Y5 699 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 TBX20Q9UMR3 447 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 F8VP50 259 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 HLA-DRAP01903 254 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 MTMR2Q13614 643 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 MIS18BP1Q6P0N0 1132 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 TMEM154Q6P9G4 183 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 HHIPL2Q6UWX4 724 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 CENPUQ71F23 418 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 THNSL1Q8IYQ7 743 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 C1orf131Q8NDD1 294 aaKnown RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 CENPTQ96BT3 561 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 NAF1Q96HR8 494 aaKnown RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 PAGR1Q9BTK6 254 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 MAK16Q9BXY0 300 aaKnown RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 SMYD3Q9H7B4 428 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 PPARGC1AQ9UBK2 798 aaKnown RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 FZD1Q9UP38 647 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 ATXN2Q99700 1313 aaKnown RBP11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 CCDC88AQ3V6T2 1871 aa11.66□□□□□ -0.54
NECTIN4-201ENST00000368012 GGPS1O95749 300 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 PAEPP09466 180 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 HOXA7P31268 230 aaPredicted RBP11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 TFDP1Q14186 410 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 TLDC1Q6P9B6 456 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 MFSD7Q6UXD7 560 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 BTNL9Q6UXG8 535 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 SEPT12Q8IYM1 358 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 SLC25A41Q8N5S1 370 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 EMC1Q8N766 993 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 PPM1NQ8N819 430 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 CCHCR1Q8TD31 782 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 FAM161BQ96MY7 647 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 IWS1Q96ST2 819 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 HEY2Q9UBP5 337 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 USH1CQ9Y6N9 552 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 AFF2P51816 1311 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 H7C0C1 242 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 GRAP2O75791 330 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 UBTFL6P0CB48 400 aaPredicted RBP11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 ATP5OP48047 213 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 BMT2Q1RMZ1 405 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 NLRP9Q7RTR0 991 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 LRRC6Q86X45 466 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 MKL1Q969V6 931 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 TARS2Q9BW92 718 aaKnown RBP11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 IRAK4Q9NWZ3 460 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 HEY1Q9Y5J3 304 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 LAMB1P07942 1786 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 K7ERI5 159 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 GSTA1P08263 222 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 INHBAP08476 426 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 TAC1P20366 129 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 BRD2P25440 801 aaKnown RBP11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 NOVP48745 357 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 CTCFP49711 727 aaPredicted RBP11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 GAD2Q05329 585 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 STAT4Q14765 748 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 SLC1A5Q15758 541 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 PODNQ7Z5L7 613 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 CCDC125Q86Z20 511 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 ZC3H3Q8IXZ2 948 aaKnown RBP11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 MCOLN2Q8IZK6 566 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 CCDC124Q96CT7 223 aaKnown RBP11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 DDX50Q9BQ39 737 aaKnown RBP11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 TBC1D10AQ9BXI6 508 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 SLC12A4Q9UP95 1085 aa11.65□□□□□ -0.54
NECTIN4-201ENST00000368012 IVNS1ABPQ9Y6Y0 642 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms