RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 JADE1Q6IE81 842 aa12.33□□□□□ -0.44
PRKN-206ENST00000366898 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.33□□□□□ -0.44
PRKN-206ENST00000366898 NCCRP1Q6ZVX7 275 aaPredicted RBP12.33□□□□□ -0.44
PRKN-206ENST00000366898 TLK2Q86UE8 772 aa12.33□□□□□ -0.44
PRKN-206ENST00000366898 IQCKQ8N0W5 287 aa12.33□□□□□ -0.44
PRKN-206ENST00000366898 LARGE2Q8N3Y3 721 aa12.33□□□□□ -0.44
PRKN-206ENST00000366898 KIAA1683Q9H0B3 1180 aa12.33□□□□□ -0.44
PRKN-206ENST00000366898 LINC00854A0A1B0GVQ3 168 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 RNF225M0QZC1 329 aaPredicted RBP12.32□□□□□ -0.44
PRKN-206ENST00000366898 UNC5CO95185 931 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 TRIM16O95361 564 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 KCNA2P16389 499 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 INPP1P49441 399 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 LBRQ14739 615 aaKnown RBP12.32□□□□□ -0.44
PRKN-206ENST00000366898 GPATCH4Q5T3I0 446 aaKnown RBP12.32□□□□□ -0.44
PRKN-206ENST00000366898 ANO7Q6IWH7 933 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 C16orf86Q6ZW13 317 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 LRRC6Q86X45 466 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 COL23A1Q86Y22 540 aaPredicted RBP12.32□□□□□ -0.44
PRKN-206ENST00000366898 KBTBD2Q8IY47 623 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 PPM1KQ8N3J5 372 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 ANKS1AQ92625 1134 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 SDCCAG3Q96C92 435 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 HBS1LQ9Y450 684 aaKnown RBP12.32□□□□□ -0.44
PRKN-206ENST00000366898 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
PRKN-206ENST00000366898 TTLL13PA6NNM8 815 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 SYCE1LA8MT33 242 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 ITGA2BP08514 1039 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 RSBN1Q5VWQ0 802 aaPredicted RBP12.32□□□□□ -0.44
PRKN-206ENST00000366898 LVRNQ6Q4G3 990 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 ANO3Q9BYT9 981 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 SMYD2Q9NRG4 433 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 STRCP1A6NGW2 1772 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 GOLGA8IPA6NC78 632 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 PSMG1O95456 288 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 CHRNA5P30532 468 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 LIN9Q5TKA1 542 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 SAPCD2Q86UD0 394 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
PRKN-206ENST00000366898 ACAP3Q96P50 834 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 STK33Q9BYT3 514 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 KLHL4Q9C0H6 718 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 CCSER1Q9C0I3 900 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 COA1Q9GZY4 146 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 UPF3AQ9H1J1 476 aaKnown RBP12.32□□□□□ -0.44
PRKN-206ENST00000366898 EBF2Q9HAK2 575 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
PRKN-206ENST00000366898 LPXNO60711 386 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 MYCLP12524 364 aaPredicted RBP12.31□□□□□ -0.44
PRKN-206ENST00000366898 CHRNA3P32297 505 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 DYNLT1P63172 113 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 CTTNQ14247 550 aaKnown RBP12.31□□□□□ -0.44
PRKN-206ENST00000366898 CDKAL1Q5VV42 579 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 PRPF39Q86UA1 669 aaKnown RBP12.31□□□□□ -0.44
PRKN-206ENST00000366898 SUN5Q8TC36 379 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 DACH2Q96NX9 599 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 NUDT12Q9BQG2 462 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 SH2D3AQ9BRG2 576 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 AMNQ9BXJ7 453 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 RPS6KL1Q9Y6S9 549 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 GPR75-ASB3A0A0A6YYF3 556 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 FAM237AA0A1B0GTK4 181 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 ZBTB5O15062 677 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 CBFA2T3O75081 653 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 CCDC166P0CW27 439 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 SRGNP10124 158 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 ITGA4P13612 1032 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 HMOX2P30519 316 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 CNPY1Q3B7I2 92 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 TMEM63BQ5T3F8 832 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.31□□□□□ -0.441e-7■■■■■ 323.4
PRKN-206ENST00000366898 NLGN1Q8N2Q7 840 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 METTL13Q8N6R0 699 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 ADNPQ9H2P0 1102 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 HACD3Q9P035 362 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 WBP4O75554 376 aaKnown RBP12.31□□□□□ -0.44
PRKN-206ENST00000366898 SEMA3DO95025 777 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 CYP11B2P19099 503 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 ZNF200P98182 395 aaPredicted RBP12.31□□□□□ -0.44
PRKN-206ENST00000366898 NR1H3Q13133 447 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 CARTPTQ16568 116 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 NT5DC1Q5TFE4 455 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 NEK10Q6ZWH5 1172 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 UNC13DQ70J99 1090 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 FAM13CQ8NE31 585 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 WWP1Q9H0M0 922 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.31□□□□□ -0.44
PRKN-206ENST00000366898 SCHIP1Q9P0W5 487 aaPredicted RBP12.31□□□□□ -0.44
PRKN-206ENST00000366898 HERC5Q9UII4 1024 aaKnown RBP12.31□□□□□ -0.44
PRKN-206ENST00000366898 PCDHAC2Q9Y5I4 1007 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 SNX5Q9Y5X3 404 aa12.31□□□□□ -0.44
PRKN-206ENST00000366898 TRPM3Q9HCF6 1732 aaPredicted RBP12.31□□□□□ -0.44
PRKN-206ENST00000366898 ABLIM1O14639 778 aa12.3□□□□□ -0.44
PRKN-206ENST00000366898 SPTLC1O15269 473 aa12.3□□□□□ -0.44
PRKN-206ENST00000366898 LYNP07948 512 aa12.3□□□□□ -0.44
PRKN-206ENST00000366898 SRGAP2CP0DJJ0 459 aa12.3□□□□□ -0.44
PRKN-206ENST00000366898 SRGAP2BP0DMP2 458 aa12.3□□□□□ -0.44
PRKN-206ENST00000366898 PRKG1Q13976 671 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms