RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 EURLQ9NYK6 297 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 CYP39A1Q9NYL5 469 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 USH1CQ9Y6N9 552 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 PLS3P13797 630 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 ATF7P17544 494 aaPredicted RBP14.4□□□□□ -0.1
PRKN-205ENST00000366897 PTDSS1P48651 473 aaKnown RBP14.4□□□□□ -0.1
PRKN-205ENST00000366897 RARRES1P49788 294 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 UGCGQ16739 394 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 PLEKHG4Q58EX7 1191 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 HHIPL2Q6UWX4 724 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 APBB1IPQ7Z5R6 666 aaPredicted RBP14.4□□□□□ -0.1
PRKN-205ENST00000366897 MTDHQ86UE4 582 aaKnown RBP14.4□□□□□ -0.1
PRKN-205ENST00000366897 MCOLN2Q8IZK6 566 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 LRRC8CQ8TDW0 803 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 PRR11Q96HE9 360 aaPredicted RBP14.4□□□□□ -0.1
PRKN-205ENST00000366897 OSBPL8Q9BZF1 889 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 DNPEPQ9ULA0 475 aa14.4□□□□□ -0.1
PRKN-205ENST00000366897 MAPK13O15264 365 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 PECAM1P16284 738 aaPredicted RBP14.39□□□□□ -0.11
PRKN-205ENST00000366897 STAT4Q14765 748 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 KRT39Q6A163 491 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 RFX8Q6ZV50 586 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 OTOAQ7RTW8 1153 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 TMEM206Q9H813 350 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 RAB20Q9NX57 234 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 NEU2Q9Y3R4 380 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 C2orf71A6NGG8 1288 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 PIK3CDO00329 1044 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 IFNB1P01574 187 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 ATP4AP20648 1035 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 ACVR2BQ13705 512 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 SPARCL1Q14515 664 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 SV2AQ7L0J3 742 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 ZBED8Q8IZ13 594 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 ZNF784Q8NCA9 323 aaPredicted RBP14.39□□□□□ -0.11
PRKN-205ENST00000366897 GRK7Q8WTQ7 553 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 UCMAQ8WVF2 138 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 SYT15Q9BQS2 421 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 ZNF148Q9UQR1 794 aa14.39□□□□□ -0.11
PRKN-205ENST00000366897 ZNFX1Q9P2E3 1918 aaKnown RBP14.38□□□□□ -0.11
PRKN-205ENST00000366897 KLRG2A4D1S0 409 aaPredicted RBP14.38□□□□□ -0.11
PRKN-205ENST00000366897 ADRA1DP25100 572 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 YARSP54577 528 aaKnown RBP14.38□□□□□ -0.11
PRKN-205ENST00000366897 IRX1P78414 480 aaPredicted RBP14.38□□□□□ -0.11
PRKN-205ENST00000366897 KLF1Q13351 362 aaPredicted RBP14.38□□□□□ -0.11
PRKN-205ENST00000366897 HHATQ5VTY9 493 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 TATDN1Q6P1N9 297 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 LVRNQ6Q4G3 990 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 DSTYKQ6XUX3 929 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 CCDC89Q8N998 374 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 GMCL1P1Q8NEA9 526 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 FBXL13Q8NEE6 735 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 DTX3LQ8TDB6 740 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 C10orf82Q8WW14 230 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 MIPEPQ99797 713 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 MAK16Q9BXY0 300 aaKnown RBP14.38□□□□□ -0.11
PRKN-205ENST00000366897 KCNH7Q9NS40 1196 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 STARD13Q9Y3M8 1113 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 A6NHS1 94 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 EDF1O60869 148 aaKnown RBP14.38□□□□□ -0.11
PRKN-205ENST00000366897 TCEA3O75764 348 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 SKIV2L2P42285 1042 aaKnown RBP14.38□□□□□ -0.11
PRKN-205ENST00000366897 GPS1Q13098 491 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 MAPK6Q16659 721 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 KHDC1Q4VXA5 237 aaKnown RBP14.38□□□□□ -0.11
PRKN-205ENST00000366897 NLRP9Q7RTR0 991 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 RFWD2Q8NHY2 731 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 DENND1AQ8TEH3 1009 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 GRAMD1AQ96CP6 724 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 MASTLQ96GX5 879 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 SMC6Q96SB8 1091 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 SUGT1Q9Y2Z0 365 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 ATRNL1Q5VV63 1379 aa14.38□□□□□ -0.11
PRKN-205ENST00000366897 COL11A2P13942 1736 aaPredicted RBP14.37□□□□□ -0.11
PRKN-205ENST00000366897 A0A0G2JND7 137 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 P4HA2O15460 535 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 KRT4P19013 534 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 CNGA1P29973 690 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 DSG3P32926 999 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 PIK3CAP42336 1068 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 ARSEP51690 589 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 BIRC2Q13490 618 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 AGGF1Q8N302 714 aaeCLIP14.37□□□□□ -0.11
PRKN-205ENST00000366897 HOMER2Q9NSB8 354 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 SPATS2LQ9NUQ6 558 aaKnown RBP14.37□□□□□ -0.11
PRKN-205ENST00000366897 COL20A1Q9P218 1284 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 SAE1Q9UBE0 346 aaPredicted RBP14.37□□□□□ -0.11
PRKN-205ENST00000366897 ZFP69BQ9UJL9 534 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRKN-205ENST00000366897 UMODL1Q5DID0 1318 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 GREB1LQ9C091 1923 aaPredicted RBP14.37□□□□□ -0.11
PRKN-205ENST00000366897 KLRC2P26717 231 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 CCDC15Q0P6D6 951 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 KIFAP3Q92845 792 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 CSRNP1Q96S65 589 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 MYPNQ86TC9 1320 aa14.37□□□□□ -0.11
PRKN-205ENST00000366897 CFAP69A5D8W1 941 aa14.36□□□□□ -0.11
PRKN-205ENST00000366897 LUC7L3O95232 432 aaKnown RBP14.36□□□□□ -0.11
PRKN-205ENST00000366897 VIL1P09327 827 aaKnown RBP14.36□□□□□ -0.11
PRKN-205ENST00000366897 UNGP13051 313 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms