RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 TTC39CQ8N584 583 aa16.79■□□□□ 0.28
CNIH4-204ENST00000366860 SP7Q8TDD2 431 aaPredicted RBP16.79■□□□□ 0.28
CNIH4-204ENST00000366860 JAKMIP2Q96AA8 810 aa16.79■□□□□ 0.28
CNIH4-204ENST00000366860 EDEM3Q9BZQ6 932 aa16.79■□□□□ 0.28
CNIH4-204ENST00000366860 GANQ9H2C0 597 aa16.79■□□□□ 0.28
CNIH4-204ENST00000366860 RWDD3Q9Y3V2 267 aa16.79■□□□□ 0.28
CNIH4-204ENST00000366860 SF3B1O75533 1304 aaKnown RBP eCLIP16.78■□□□□ 0.286e-8■■■■■ 80.2
CNIH4-204ENST00000366860 A0A1W2PQJ5 194 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 KPNA7A9QM74 516 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 TRAPPC3O43617 180 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 CST3P01034 146 aaPredicted RBP16.78■□□□□ 0.28
CNIH4-204ENST00000366860 UCHL3P15374 230 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 ALDH7A1P49419 539 aaKnown RBP16.78■□□□□ 0.28
CNIH4-204ENST00000366860 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.289e-7■■■■■ 61.1
CNIH4-204ENST00000366860 MFAP3P55082 362 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 ELAVL2Q12926 359 aaKnown RBP16.78■□□□□ 0.28
CNIH4-204ENST00000366860 SHHQ15465 462 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 WDR72Q3MJ13 1102 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 KLHDC7AQ5VTJ3 777 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 CACNA2D4Q7Z3S7 1137 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 TMCO2Q7Z6W1 182 aaPredicted RBP16.78■□□□□ 0.28
CNIH4-204ENST00000366860 PPFIBP1Q86W92 1011 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 FIBCD1Q8N539 461 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 ZNF558Q96NG5 402 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 PI4K2AQ9BTU6 479 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 COLEC11Q9BWP8 271 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 SIX2Q9NPC8 291 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 GDAP2Q9NXN4 497 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 IMPACTQ9P2X3 320 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 DNAJB4Q9UDY4 337 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 STK39Q9UEW8 545 aa16.78■□□□□ 0.28
CNIH4-204ENST00000366860 PRG3Q9Y2Y8 225 aaPredicted RBP16.78■□□□□ 0.28
CNIH4-204ENST00000366860 PPEF2O14830 753 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 B4GALT3O60512 393 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 KIF4AO95239 1232 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 ALDH2P05091 517 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 ODC1P11926 461 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 SLC11A1P49279 550 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 KLK7P49862 253 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 LILRA4P59901 499 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 MLLT1Q03111 559 aaPredicted RBP16.77■□□□□ 0.28
CNIH4-204ENST00000366860 LRMPQ12912 555 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 CUL2Q13617 745 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 ZNF397Q8NF99 534 aaPredicted RBP16.77■□□□□ 0.28
CNIH4-204ENST00000366860 SPATA18Q8TC71 538 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 SPAG5Q96R06 1193 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 TTYH3Q9C0H2 523 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 NUCKS1Q9H1E3 243 aaKnown RBP16.77■□□□□ 0.28
CNIH4-204ENST00000366860 CWH43Q9H720 699 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 CYP3A43Q9HB55 503 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 ADAM28Q9UKQ2 775 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 MYO6Q9UM54 1294 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 FAN1Q9Y2M0 1017 aa16.77■□□□□ 0.28
CNIH4-204ENST00000366860 MRPL42Q9Y6G3 142 aaKnown RBP16.77■□□□□ 0.28
CNIH4-204ENST00000366860 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.27
CNIH4-204ENST00000366860 HUS1O60921 280 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 ASPAP45381 313 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 BCAR1P56945 870 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 POLR2FP61218 127 aaKnown RBP16.76■□□□□ 0.27
CNIH4-204ENST00000366860 RAPGEF1Q13905 1077 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 SPOPLQ6IQ16 392 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 PHLDB3Q6NSJ2 640 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 DPH6Q7L8W6 267 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 CNGA4Q8IV77 575 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 ARHGEF19Q8IW93 802 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 TDHQ8IZJ6 230 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 TOP6BLQ8N6T0 577 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 C3orf58Q8NDZ4 430 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 PAAF1Q9BRP4 392 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 BCO2Q9BYV7 579 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 DNAI2Q9GZS0 605 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 APOBEC3GQ9HC16 384 aaKnown RBP16.76■□□□□ 0.27
CNIH4-204ENST00000366860 NXF1Q9UBU9 619 aaKnown RBP16.76■□□□□ 0.27
CNIH4-204ENST00000366860 DNAJC12Q9UKB3 198 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 DSEQ9UL01 958 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 SNX9Q9Y5X1 595 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 FHOD1Q9Y613 1164 aa16.76■□□□□ 0.27
CNIH4-204ENST00000366860 VWA8A3KMH1 1905 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 NRP1O14786 923 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 NOL4O94818 638 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 GYPCP04921 128 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 GALTP07902 379 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 FAM163BP0C2L3 166 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 RAB30Q15771 203 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 PTPN21Q16825 1174 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 IQCEQ6IPM2 695 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 KCNT2Q6UVM3 1135 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 DSTYKQ6XUX3 929 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 SCARA5Q6ZMJ2 495 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 TMEM86AQ8N2M4 240 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 COLGALT1Q8NBJ5 622 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 APPL2Q8NEU8 664 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 CLP1Q92989 425 aaKnown RBP16.75■□□□□ 0.27
CNIH4-204ENST00000366860 TMEM169Q96HH4 297 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 SUSD3Q96L08 255 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 MMS19Q96T76 1030 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 NAA15Q9BXJ9 866 aaKnown RBP16.75■□□□□ 0.27
CNIH4-204ENST00000366860 UBE2TQ9NPD8 197 aaPredicted RBP16.75■□□□□ 0.27
CNIH4-204ENST00000366860 MARCH5Q9NX47 278 aa16.75■□□□□ 0.27
CNIH4-204ENST00000366860 HCSTQ9UBK5 93 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms