RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 KIF26AQ9ULI4 1882 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-209ENST00000366735 DENND4CQ5VZ89 1909 aa13.52□□□□□ -0.24
MRPL55-209ENST00000366735 EP300Q09472 2414 aaPredicted RBP13.52□□□□□ -0.24
MRPL55-209ENST00000366735 LRRN2O75325 713 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 TOM1L1O75674 476 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 F13A1P00488 732 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 PROZP22891 400 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 U2AF2P26368 475 aaKnown RBP eCLIP13.52□□□□□ -0.252e-8■□□□□ 10
MRPL55-209ENST00000366735 NRLP54845 237 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 SOX4Q06945 474 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-209ENST00000366735 PTGDRQ13258 359 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 SLC5A9Q2M3M2 681 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 C1orf228Q6PIY5 440 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 E2F7Q96AV8 911 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 CLDN23Q96B33 292 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 RMDN1Q96DB5 314 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 MSANTD3Q96H12 275 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 CDK5RAP3Q96JB5 506 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 SUSD3Q96L08 255 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 ANP32EQ9BTT0 268 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 TRMT61BQ9BVS5 477 aaKnown RBP13.52□□□□□ -0.25
MRPL55-209ENST00000366735 TARS2Q9BW92 718 aaKnown RBP13.52□□□□□ -0.25
MRPL55-209ENST00000366735 GPR88Q9GZN0 384 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 KCND2Q9NZV8 630 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 AFF4Q9UHB7 1163 aaKnown RBP13.52□□□□□ -0.25
MRPL55-209ENST00000366735 FBXL5Q9UKA1 691 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 ZNF292O60281 2723 aa13.52□□□□□ -0.25
MRPL55-209ENST00000366735 VPS37CA5D8V6 355 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-209ENST00000366735 E9PMD0 336 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 GOLGA6L22H0YM25 854 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 SLC16A4O15374 487 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 SCP2P22307 547 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 GUCY2CP25092 1073 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 TARSP26639 723 aaKnown RBP13.51□□□□□ -0.25
MRPL55-209ENST00000366735 YWHAHQ04917 246 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-209ENST00000366735 KYAT1Q16773 422 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 PRSS36Q5K4E3 855 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 RINT1Q6NUQ1 792 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 CD300LGQ6UXG3 332 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 ZPBP2Q6X784 338 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 MAML2Q8IZL2 1156 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-209ENST00000366735 C4orf32Q8N8J7 132 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 SUMF1Q8NBK3 374 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 SPIRE2Q8WWL2 714 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 BICD1Q96G01 975 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 POLD4Q9HCU8 107 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 PRMT8Q9NR22 394 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-209ENST00000366735 HEBP1Q9NRV9 189 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 GMEB2Q9UKD1 530 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 RAB23Q9ULC3 237 aa13.51□□□□□ -0.25
MRPL55-209ENST00000366735 SMG5Q9UPR3 1016 aaKnown RBP13.51□□□□□ -0.25
MRPL55-209ENST00000366735 DMXL1Q9Y485 3027 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 CLDN3O15551 220 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 TBC1D4O60343 1298 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 PLS3P13797 630 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 PSMC3P17980 439 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 CD72P21854 359 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 PPP2R3AQ06190 1150 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 TWF1Q12792 350 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 MRPL58Q14197 206 aaKnown RBP13.5□□□□□ -0.25
MRPL55-209ENST00000366735 ZRSR1Q15695 479 aaKnown RBP13.5□□□□□ -0.25
MRPL55-209ENST00000366735 TANGO2Q6ICL3 276 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 USP37Q86T82 979 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 DAW1Q8N136 415 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 ZBTB44Q8NCP5 570 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 DDX12PQ92771 950 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 SMARCD2Q92925 531 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 ZMAT2Q96NC0 199 aaKnown RBP13.5□□□□□ -0.25
MRPL55-209ENST00000366735 ASB16Q96NS5 453 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 RUSC1Q9BVN2 902 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 EPC1Q9H2F5 836 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 SLITRK6Q9H5Y7 841 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 PLEKHA5Q9HAU0 1116 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 TRPV5Q9NQA5 729 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 LARSQ9P2J5 1176 aaKnown RBP13.5□□□□□ -0.25
MRPL55-209ENST00000366735 NDRG2Q9UN36 371 aaKnown RBP13.5□□□□□ -0.25
MRPL55-209ENST00000366735 MTF2Q9Y483 593 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-209ENST00000366735 PCDHB6Q9Y5E3 794 aa13.5□□□□□ -0.25
MRPL55-209ENST00000366735 CACNA1AO00555 2505 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 OBSL1O75147 1896 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 H3BQV1 296 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 ZNF263O14978 683 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 FCARP24071 287 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 ABCD1P33897 745 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 CCR3P51677 355 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 LMNB2Q03252 620 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 MAPK7Q13164 816 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 GRM2Q14416 872 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 RILPL1Q5EBL4 403 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 FAM78AQ5JUQ0 283 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 C1orf186Q6ZWK4 172 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 TAS1R3Q7RTX0 852 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 YAF2Q8IY57 180 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 CSGALNACT1Q8TDX6 532 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 C18orf25Q96B23 403 aaPredicted RBP13.49□□□□□ -0.25
MRPL55-209ENST00000366735 TSPAN18Q96SJ8 248 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 NTPCRQ9BSD7 190 aaKnown RBP13.49□□□□□ -0.25
MRPL55-209ENST00000366735 CHRDQ9H2X0 955 aa13.49□□□□□ -0.25
MRPL55-209ENST00000366735 ZSCAN16Q9H4T2 348 aaPredicted RBP13.49□□□□□ -0.25
MRPL55-209ENST00000366735 UBQLN1Q9UMX0 589 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms