RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 FAM71AQ8IYT1 594 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.38□□□□□ -0.43
HPS1-204ENST00000361490 RPGRIP1Q96KN7 1286 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 TRIM51Q9BSJ1 452 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 STRA6Q9BX79 667 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 CALN1Q9BXU9 219 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 EIF2AQ9BY44 585 aaKnown RBP12.38□□□□□ -0.43
HPS1-204ENST00000361490 TMEM134Q9H6X4 195 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 OGFRQ9NZT2 677 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 C12orf56Q8IXR9 622 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 EFCAB13Q8IY85 973 aa12.38□□□□□ -0.43
HPS1-204ENST00000361490 TTI1O43156 1089 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 ADCY6O43306 1168 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 HSF2BPO75031 334 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 C4BPAP04003 597 aaKnown RBP12.37□□□□□ -0.43
HPS1-204ENST00000361490 GNAT1P11488 350 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 AKR1A1P14550 325 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 EIF4BP23588 611 aaKnown RBP12.37□□□□□ -0.43
HPS1-204ENST00000361490 GRB14Q14449 540 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 CASP8Q14790 479 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 KCNT1Q5JUK3 1230 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 LMO3Q8TAP4 145 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 AFAP1L1Q8TED9 768 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
HPS1-204ENST00000361490 C18orf25Q96B23 403 aaPredicted RBP12.37□□□□□ -0.43
HPS1-204ENST00000361490 FAM107BQ9H098 131 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 SNX25Q9H3E2 840 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 XPNPEP3Q9NQH7 507 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 PDLIM7Q9NR12 457 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 STIM2Q9P246 746 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 RRN3P2A6NIE6 340 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 VNN1O95497 513 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 CARSP49589 748 aaKnown RBP12.37□□□□□ -0.43
HPS1-204ENST00000361490 YWHAEP62258 255 aaKnown RBP12.37□□□□□ -0.43
HPS1-204ENST00000361490 AMPD2Q01433 879 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 MBTD1Q05BQ5 628 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 CFAP58Q5T655 872 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 ACAD10Q6JQN1 1059 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 NOTUMQ6P988 496 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 ENOSF1Q7L5Y1 443 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 TAX1BP1Q86VP1 789 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 WDR49Q8IV35 697 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.37□□□□□ -0.43
HPS1-204ENST00000361490 C12orf29Q8N999 325 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 HSPH1Q92598 858 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 LPPQ93052 612 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 C16orf70Q9BSU1 422 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 COG5Q9UP83 839 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 MCM3APO60318 1980 aa12.37□□□□□ -0.43
HPS1-204ENST00000361490 KIAA0391O15091 583 aaKnown RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 MAP3K6O95382 1288 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 ATN1P54259 1190 aaPredicted RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 TRADDQ15628 312 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 DEFB115Q30KQ5 88 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 SGO2Q562F6 1265 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 MEI1Q5TIA1 1274 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 TTC19Q6DKK2 380 aaPredicted RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 RUFY4Q6ZNE9 571 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 ZC3H3Q8IXZ2 948 aaKnown RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 ZMYND15Q9H091 742 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 MYH9P35579 1960 aaKnown RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 DAPK3O43293 454 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 RAD51CO43502 376 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 RECQL4O94761 1208 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 ITGBL1O95965 494 aaPredicted RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 PSMA2P25787 234 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 HPDP32754 393 aaPredicted RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 ARPP19P56211 112 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 RWDD2BP57060 319 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 SYCP2LQ5T4T6 812 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 FAM102AQ5T9C2 384 aaPredicted RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 RSRC2Q7L4I2 434 aaKnown RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 ATG4AQ8WYN0 398 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 ZFP42Q96MM3 310 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 GOLGA6BA6NDN3 693 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 TMEM88BA6NKF7 163 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 PJA2O43164 708 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 ACAT1P24752 427 aaKnown RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 RBP5P82980 135 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 B4GALNT4Q76KP1 1039 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 BEST2Q8NFU1 509 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 PBKQ96KB5 322 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 NAP1L3Q99457 506 aaPredicted RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.36□□□□□ -0.435e-7■■□□□ 13.4
HPS1-204ENST00000361490 MRPL47Q9HD33 250 aaKnown RBP12.36□□□□□ -0.43
HPS1-204ENST00000361490 ZNF148Q9UQR1 794 aa12.36□□□□□ -0.43
HPS1-204ENST00000361490 IGKV6D-21A0A0A0MT36 114 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 KRT1P04264 644 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 YY1P25490 414 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 GCNT1Q02742 428 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 NBPF20Q3BBV1 942 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 HP1BP3Q5SSJ5 553 aaPredicted RBP12.35□□□□□ -0.43
HPS1-204ENST00000361490 DSTYKQ6XUX3 929 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 ZNF365Q70YC5 407 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 MSANTD4Q8NCY6 345 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 IFT122Q9HBG6 1241 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 ATP8A1Q9Y2Q0 1164 aa12.35□□□□□ -0.43
HPS1-204ENST00000361490 MYADML2A6NDP7 307 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms