RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 SHBGP04278 402 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 BRD2P25440 801 aaKnown RBP21.36■■□□□ 1.01
CHD1L-201ENST00000361293 SGO2Q562F6 1265 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 PLEKHA7Q6IQ23 1121 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 LCMT1Q9UIC8 334 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 ANK1P16157 1881 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 WEE2P0C1S8 567 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 EPHX2P34913 555 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 SLC1A1P43005 524 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 FNTAP49354 379 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 IGBP1P78318 339 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 GRM1Q13255 1194 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 ZNF568Q3ZCX4 644 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 LIN9Q5TKA1 542 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 ATF7IP2Q5U623 682 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 EMC10Q5UCC4 262 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 MPZL3Q6UWV2 235 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 TSHZ1Q6ZSZ6 1077 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 FASTKD5Q7L8L6 764 aaKnown RBP21.35■■□□□ 1.01
CHD1L-201ENST00000361293 PPP1R16BQ96T49 567 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 FZD8Q9H461 694 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 SMARCAD1Q9H4L7 1026 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 CISHQ9NSE2 258 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 BCCIPQ9P287 314 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHD1L-201ENST00000361293 RPL7AP62424 266 aaKnown RBP21.35■■□□□ 1.01
CHD1L-201ENST00000361293 DUOXA2Q1HG44 320 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 ANKS1BQ7Z6G8 1248 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 UPF1Q92900 1129 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHD1L-201ENST00000361293 MROH8Q9H579 483 aa21.35■■□□□ 1.01
CHD1L-201ENST00000361293 R3HDM2Q9Y2K5 976 aaKnown RBP21.35■■□□□ 1.01
CHD1L-201ENST00000361293 ACKR2O00590 384 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 GJC1P36383 396 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 AP3M2P53677 418 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 PMS2P54278 862 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 ARMCX2Q7L311 632 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 BCAS4Q8TDM0 211 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 RNF25Q96BH1 459 aaPredicted RBP21.34■■□□□ 1.01
CHD1L-201ENST00000361293 HEMGNQ9BXL5 484 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 NIF3L1Q9GZT8 377 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 XYLT2Q9H1B5 865 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 C2orf40Q9H1Z8 148 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 USTQ9Y2C2 406 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 TLR3O15455 904 aaKnown RBP21.34■■□□□ 1.01
CHD1L-201ENST00000361293 ZEB2O60315 1214 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 TCF4P15884 667 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 MBTD1Q05BQ5 628 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 TTLL4Q14679 1199 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 KRT71Q3SY84 523 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 PLVAPQ9BX97 442 aa21.34■■□□□ 1.01
CHD1L-201ENST00000361293 TP73O15350 636 aa21.33■■□□□ 1.01
CHD1L-201ENST00000361293 ECEL1O95672 775 aa21.33■■□□□ 1.01
CHD1L-201ENST00000361293 CXCL8P10145 99 aa21.33■■□□□ 1.01
CHD1L-201ENST00000361293 MMP8P22894 467 aa21.33■■□□□ 1.01
CHD1L-201ENST00000361293 C1QBPQ07021 282 aaKnown RBP21.33■■□□□ 1.01
CHD1L-201ENST00000361293 USP50Q70EL3 339 aaPredicted RBP21.33■■□□□ 1.01
CHD1L-201ENST00000361293 TFAP2BQ92481 460 aa21.33■■□□□ 1.01
CHD1L-201ENST00000361293 VCPIP1Q96JH7 1222 aa21.33■■□□□ 1.01
CHD1L-201ENST00000361293 FAM118BQ9BPY3 351 aa21.33■■□□□ 1.01
CHD1L-201ENST00000361293 CDT1Q9H211 546 aa21.33■■□□□ 1.01
CHD1L-201ENST00000361293 PABPC3Q9H361 631 aaKnown RBP21.33■■□□□ 1.01
CHD1L-201ENST00000361293 SEMA4AQ9H3S1 761 aa21.33■■□□□ 1.01
CHD1L-201ENST00000361293 HBP1O60381 514 aa21.33■■□□□ 1
CHD1L-201ENST00000361293 C22orf31O95567 290 aa21.33■■□□□ 1
CHD1L-201ENST00000361293 TMEM191BP0C7N4 346 aa21.33■■□□□ 1
CHD1L-201ENST00000361293 RALAP11233 206 aa21.33■■□□□ 1
CHD1L-201ENST00000361293 ASPAP45381 313 aa21.33■■□□□ 1
CHD1L-201ENST00000361293 KRT17Q04695 432 aa21.33■■□□□ 1
CHD1L-201ENST00000361293 ARHGAP1Q07960 439 aa21.33■■□□□ 1
CHD1L-201ENST00000361293 TMEM132AQ24JP5 1023 aa21.33■■□□□ 1
CHD1L-201ENST00000361293 CCDC50Q8IVM0 306 aa21.33■■□□□ 1
CHD1L-201ENST00000361293 MRPL47Q9HD33 250 aaKnown RBP21.33■■□□□ 1
CHD1L-201ENST00000361293 PASKQ96RG2 1323 aa21.33■■□□□ 1
CHD1L-201ENST00000361293 ERLIN2O94905 339 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 TRPC3Q13507 836 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 PPP1R7Q15435 360 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 SGSM1Q2NKQ1 1148 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 ZNF699Q32M78 642 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 EAPPQ56P03 285 aaPredicted RBP21.32■■□□□ 1
CHD1L-201ENST00000361293 RUFY4Q6ZNE9 571 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 ART4Q93070 314 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 IFT122Q9HBG6 1241 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 KLHL11Q9NVR0 708 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 POLIQ9UNA4 740 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 NOVA2Q9UNW9 492 aaKnown RBP21.32■■□□□ 1
CHD1L-201ENST00000361293 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.32■■□□□ 1
CHD1L-201ENST00000361293 MEFVO15553 781 aaPredicted RBP21.32■■□□□ 1
CHD1L-201ENST00000361293 POTEJP0CG39 1038 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 LSP1P33241 339 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 CCT5P48643 541 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 SLC26A2P50443 739 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 ZNF252P-AS1Q0IIN9 211 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 EXOC8Q8IYI6 725 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 SYT17Q9BSW7 474 aa21.32■■□□□ 1
CHD1L-201ENST00000361293 GPR25O00155 361 aa21.31■■□□□ 1
CHD1L-201ENST00000361293 INSRRP14616 1297 aa21.31■■□□□ 1
CHD1L-201ENST00000361293 FGFR4P22455 802 aa21.31■■□□□ 1
CHD1L-201ENST00000361293 SSR1P43307 286 aaKnown RBP21.31■■□□□ 1
CHD1L-201ENST00000361293 IFFO1Q0D2I5 559 aa21.31■■□□□ 1
CHD1L-201ENST00000361293 KLF1Q13351 362 aaPredicted RBP21.31■■□□□ 1
CHD1L-201ENST00000361293 TFDP1Q14186 410 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms