RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 JPH2Q9BR39 696 aaPredicted RBP24.08■■□□□ 1.45
LDB1-201ENST00000361198 INO80BQ9C086 356 aaPredicted RBP24.08■■□□□ 1.45
LDB1-201ENST00000361198 CENPHQ9H3R5 247 aa24.08■■□□□ 1.45
LDB1-201ENST00000361198 PROZP22891 400 aa24.08■■□□□ 1.44
LDB1-201ENST00000361198 LIG3P49916 1009 aa24.08■■□□□ 1.44
LDB1-201ENST00000361198 NOMO3P69849 1222 aa24.08■■□□□ 1.44
LDB1-201ENST00000361198 DHX34Q14147 1143 aaKnown RBP24.08■■□□□ 1.44
LDB1-201ENST00000361198 TSHZ1Q6ZSZ6 1077 aa24.08■■□□□ 1.44
LDB1-201ENST00000361198 MICALCLQ6ZW33 695 aa24.08■■□□□ 1.44
LDB1-201ENST00000361198 SLC13A5Q86YT5 568 aaPredicted RBP24.08■■□□□ 1.44
LDB1-201ENST00000361198 JAMLQ86YT9 394 aa24.08■■□□□ 1.44
LDB1-201ENST00000361198 TRIM11Q96F44 468 aa24.08■■□□□ 1.44
LDB1-201ENST00000361198 FZD8Q9H461 694 aa24.08■■□□□ 1.44
LDB1-201ENST00000361198 PTPRHQ9HD43 1115 aa24.08■■□□□ 1.44
LDB1-201ENST00000361198 ZDHHC18Q9NUE0 388 aa24.08■■□□□ 1.44
LDB1-201ENST00000361198 LOC102724159A0A0B4J2E5 919 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 ACKR2O00590 384 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 MYL6P60660 151 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 PWP2Q15269 919 aaKnown RBP24.07■■□□□ 1.44
LDB1-201ENST00000361198 THNSL1Q8IYQ7 743 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 MAGOHBQ96A72 148 aaKnown RBP24.07■■□□□ 1.44
LDB1-201ENST00000361198 C11orf70Q9BRQ4 267 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 MINDY3Q9H8M7 445 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.07■■□□□ 1.44
LDB1-201ENST00000361198 PNMA3Q9UL41 463 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 PCNTO95613 3336 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 THAP12O43422 761 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 CHRNA3P32297 505 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 EIF3BP55884 814 aaKnown RBP24.07■■□□□ 1.44
LDB1-201ENST00000361198 ARHGAP1Q07960 439 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 ATF7IP2Q5U623 682 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 TTC27Q6P3X3 843 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 MPZL3Q6UWV2 235 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 UBR7Q8N806 425 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 CEP120Q8N960 986 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 GPRC5AQ8NFJ5 357 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 ERAP1Q9NZ08 941 aa24.07■■□□□ 1.44
LDB1-201ENST00000361198 PAEPP09466 180 aa24.06■■□□□ 1.44
LDB1-201ENST00000361198 HOXC6P09630 235 aa24.06■■□□□ 1.44
LDB1-201ENST00000361198 PTGIRP43119 386 aa24.06■■□□□ 1.44
LDB1-201ENST00000361198 OSTNP61366 133 aa24.06■■□□□ 1.44
LDB1-201ENST00000361198 IGBP1P78318 339 aa24.06■■□□□ 1.44
LDB1-201ENST00000361198 TFDP1Q14186 410 aa24.06■■□□□ 1.44
LDB1-201ENST00000361198 DUOXA2Q1HG44 320 aa24.06■■□□□ 1.44
LDB1-201ENST00000361198 TRIM72Q6ZMU5 477 aa24.06■■□□□ 1.44
LDB1-201ENST00000361198 ZNF408Q9H9D4 720 aa24.06■■□□□ 1.44
LDB1-201ENST00000361198 GLTPD2A6NH11 291 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 ZNF132P52740 706 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 PPP2R2AP63151 447 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 LLGL1Q15334 1064 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 SIX1Q15475 284 aaPredicted RBP24.05■■□□□ 1.44
LDB1-201ENST00000361198 ZNF568Q3ZCX4 644 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 EEF1DP3Q658K8 133 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 TAPT1Q6NXT6 567 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 ADAM22Q9P0K1 906 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 PCYOX1Q9UHG3 505 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 TRAPPC3O43617 180 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 C22orf31O95567 290 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 IQCF3P0C7M6 154 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 ADORA2AP29274 412 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 TFAMQ00059 246 aaKnown RBP24.05■■□□□ 1.44
LDB1-201ENST00000361198 ZNF792Q3KQV3 632 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 CCDC137Q6PK04 289 aaKnown RBP24.05■■□□□ 1.44
LDB1-201ENST00000361198 ZNF606Q8WXB4 792 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 PLXNA1Q9UIW2 1896 aa24.05■■□□□ 1.44
LDB1-201ENST00000361198 MGAMO43451 1857 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 E7EVH7 732 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 KIAA0754O94854 1291 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 RARAP10276 462 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 MBTD1Q05BQ5 628 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 GMNCA6NCL1 334 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 PDHXO00330 501 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 LGALS2P05162 132 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 INSRRP14616 1297 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 CD58P19256 250 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 SURF1Q15526 300 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 CYP1B1Q16678 543 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 TMEM132AQ24JP5 1023 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 DAB2IPQ5VWQ8 1189 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 C6orf89Q6UWU4 347 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 OTUD6BQ8N6M0 293 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 KAT2BQ92831 832 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 MTUS1Q9ULD2 1270 aa24.04■■□□□ 1.44
LDB1-201ENST00000361198 NOVA2Q9UNW9 492 aaKnown RBP24.04■■□□□ 1.44
LDB1-201ENST00000361198 NUDT17P0C025 328 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 PTP4A2Q12974 167 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 MKRN3Q13064 507 aaKnown RBP24.03■■□□□ 1.44
LDB1-201ENST00000361198 SGSM1Q2NKQ1 1148 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 MAMDC4Q6UXC1 1216 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 MMS22LQ6ZRQ5 1243 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 PHF13Q86YI8 300 aaPredicted RBP24.03■■□□□ 1.44
LDB1-201ENST00000361198 TLCD1Q96CP7 247 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 EPB41L4BQ9H329 900 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 ATP8A1Q9Y2Q0 1164 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 SNX24Q9Y343 169 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 ANK1P16157 1881 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 CSDE1O75534 798 aaKnown RBP24.03■■□□□ 1.44
LDB1-201ENST00000361198 FSBPO95073 299 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 POTEJP0CG39 1038 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 SLC1A1P43005 524 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms