RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 C10orf88Q9H8K7 445 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 PCMTD2Q9NV79 361 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 CHORDC1Q9UHD1 332 aaPredicted RBP12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 TCN1P20061 433 aaPredicted RBP12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 BYSLQ13895 437 aaKnown RBP12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 WDR72Q3MJ13 1102 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 APPL2Q8NEU8 664 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 FAM151AQ8WW52 585 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 SEPT1Q8WYJ6 367 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 SGSM3Q96HU1 749 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 DDX50Q9BQ39 737 aaKnown RBP12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 TSSK1BQ9BXA7 367 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 KCND2Q9NZV8 630 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 PDP2Q9P2J9 529 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 PRR12Q9ULL5 1215 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 AGAP1Q9UPQ3 857 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 A0A1B0GTH6 734 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 CCT8L1PA6NM43 557 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 IGF2BP3O00425 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 TRAPPC3O43617 180 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 TMCC1O94876 653 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 NTSR2O95665 410 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 IFNA8P32881 189 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 FXR1P51114 621 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 SEC24CP53992 1094 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 RBP5P82980 135 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 RAD51Q06609 339 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 BCORL1Q5H9F3 1711 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 ELMO2Q96JJ3 720 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 REEP2Q9BRK0 252 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 ASPSCR1Q9BZE9 553 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 PLEKHA5Q9HAU0 1116 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 GID8Q9NWU2 228 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 ZNF235Q14590 738 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 ANGEL2Q5VTE6 544 aaKnown RBP12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 ATL2Q8NHH9 583 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 XPO6Q96QU8 1125 aaKnown RBP12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 KIF2CQ99661 725 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 VCPKMTQ9H867 229 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 PSMD14O00487 310 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 STAT4Q14765 748 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 CLEC17AQ6ZS10 378 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 B4GALNT2Q8NHY0 566 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 GTF3C2Q8WUA4 911 aaPredicted RBP12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 SH3KBP1Q96B97 665 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 HPS4Q9NQG7 708 aa12.8□□□□□ -0.36
CCDC144A-204ENST00000360524 RAD51CO43502 376 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 STILQ15468 1287 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 TTC23LQ6PF05 361 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 CCNI2Q6ZMN8 369 aaPredicted RBP12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 KIRREL3Q8IZU9 778 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 PPHLN1Q8NEY8 458 aaKnown RBP12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 PBXIP1Q96AQ6 731 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 C9orf72Q96LT7 481 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 KLF6Q99612 283 aaPredicted RBP12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 WWP1Q9H0M0 922 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 ZFATQ9P243 1243 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 TJP2Q9UDY2 1190 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 MAD2L2Q9UI95 211 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 DGKIO75912 1065 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 AGTP01019 485 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 NR3C2P08235 984 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 ENO3P13929 434 aaPredicted RBP12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 IL10P22301 178 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 SERPINB1P30740 379 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 GALCP54803 685 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 LRIG3Q6UXM1 1119 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 PKD2L2Q9NZM6 624 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 AIPL1Q9NZN9 384 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 APEX2Q9UBZ4 518 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 ZNF212Q9UDV6 495 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 CAMSAP1Q5T5Y3 1602 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 PTPRUQ92729 1446 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 DYNC1LI2O43237 492 aaPredicted RBP12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 RFC5P40937 340 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 EMC2Q15006 297 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 STYK1Q6J9G0 422 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 CLEC10AQ8IUN9 316 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 CYGBQ8WWM9 190 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 EPAS1Q99814 870 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 PITPNM2Q9BZ72 1349 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 MAGEA13PA6NCF6 341 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 GRAP2O75791 330 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 APRTP07741 180 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 RASA1P20936 1047 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 HSD17B4P51659 736 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 TMEM132DQ14C87 1099 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 GALNT4Q8N4A0 578 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 RBM15Q96T37 977 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 RUBCNLQ9H714 662 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 POLRMTO00411 1230 aaKnown RBP12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 FAM107AO95990 144 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 PYGLP06737 847 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 PDHBP11177 359 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 TPI1P60174 286 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 DDX42Q86XP3 938 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 RCOR2Q8IZ40 523 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 OR9Q1Q8NGQ5 310 aa12.79□□□□□ -0.36
CCDC144A-204ENST00000360524 ERP27Q96DN0 273 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms