RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SPP2Q13103 211 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 DGKDQ16760 1214 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 DIS3LQ8TF46 1054 aaKnown RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 RSPH1Q8WYR4 309 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 RNF25Q96BH1 459 aaPredicted RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 C17orf75Q9HAS0 396 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 COL15A1P39059 1388 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 CDH16O75309 829 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 CYFIP2Q96F07 1278 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 DNAJC7Q99615 494 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 OSBPL5Q9H0X9 879 aaPredicted RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 EPC1Q9H2F5 836 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 ARSEP51690 589 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 TRIM8Q9BZR9 551 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 RPAP3Q9H6T3 665 aaPredicted RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 TTC7AQ9ULT0 858 aaPredicted RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 PRG3Q9Y2Y8 225 aaPredicted RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 SPHKAPQ2M3C7 1700 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 PHF2O75151 1096 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 SUSD4Q5VX71 490 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 MUC3BQ9H195 1237 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 TMEM245Q9H330 911 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 PSMC3IPQ9P2W1 217 aaPredicted RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 ZNRF3Q9ULT6 936 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 HARS2P49590 506 aaKnown RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 EIF3EP60228 445 aaKnown RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 DCP1AQ9NPI6 582 aaPredicted RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 ARL2BPQ9Y2Y0 163 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 IGSF9BQ9UPX0 1349 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 MYH8P13535 1937 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 HOXA2O43364 376 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 SOAT2O75908 522 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 ITGA4P13612 1032 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 ETFBP38117 255 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 GGCXP38435 758 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 PTPN12Q05209 780 aaKnown RBP10.13□□□□□ -0.79
CUX1-203ENST00000360264 DMTNQ08495 405 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 YIPF2Q9BWQ6 316 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 SLC30A1Q9Y6M5 507 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 LTKP29376 864 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 EVA1BQ9NVM1 165 aa10.13□□□□□ -0.79
CUX1-203ENST00000360264 MYO1CO00159 1063 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 ITIH2P19823 946 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 IZUMO3Q5VZ72 239 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 GPRC5AQ8NFJ5 357 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 BTN2A2Q8WVV5 523 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 TMEM51Q9NW97 253 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 SSU72P8A0A1W2PR75 194 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 RARBP10826 455 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 ZNF438Q7Z4V0 828 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 MMGT1Q8N4V1 131 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 CNPY3Q9BT09 278 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 CAB39Q9Y376 341 aaPredicted RBP10.12□□□□□ -0.79
CUX1-203ENST00000360264 TET3O43151 1660 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 CYP2D7A0A087X1C5 515 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 HBP1O60381 514 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 SNRNP35Q16560 246 aaKnown RBP10.12□□□□□ -0.79
CUX1-203ENST00000360264 C3orf20Q8ND61 904 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 RDM1Q8NG50 284 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 MRPL1Q9BYD6 325 aaKnown RBP10.12□□□□□ -0.79
CUX1-203ENST00000360264 KCNN4O15554 427 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 RTN2O75298 545 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 STX3Q13277 289 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 STRIP1Q5VSL9 837 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 CHMP1BQ7LBR1 199 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 ROPN1BQ9BZX4 212 aaPredicted RBP10.12□□□□□ -0.79
CUX1-203ENST00000360264 ROPN1Q9HAT0 212 aaPredicted RBP10.12□□□□□ -0.79
CUX1-203ENST00000360264 PRDM5Q9NQX1 630 aaPredicted RBP10.12□□□□□ -0.79
CUX1-203ENST00000360264 FLT1P17948 1338 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 HEATR9A2RTY3 570 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 CYTH3O43739 400 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 EYA4O95677 639 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 SV2CQ496J9 727 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 TBC1D23Q9NUY8 699 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 CHMP2BQ9UQN3 213 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 MROH7-TTC4A0A0A0MT08 1334 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 CDC25AP30304 524 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 RABGAP1LQ5R372 815 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 LRIG3Q6UXM1 1119 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 GLYCTKQ8IVS8 523 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 EME1Q96AY2 570 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 EMILIN2Q9BXX0 1053 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 PCSK1NQ9UHG2 260 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 CEP170Q5SW79 1584 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 GH1P01241 217 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 RNF180Q86T96 592 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 PLEKHF1Q96S99 279 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 EPS8L2Q9H6S3 715 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 CYP4A22Q5TCH4 519 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 PI16Q6UXB8 463 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 FGD2Q7Z6J4 655 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 SNX31Q8N9S9 440 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 SENP7Q9BQF6 1050 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 OSBPL10Q9BXB5 764 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 TDRD3Q9H7E2 651 aaKnown RBP10.12□□□□□ -0.79
CUX1-203ENST00000360264 RNF181Q9P0P0 153 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 ENOPH1Q9UHY7 261 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 NEDD4P46934 1319 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 SLC11A2P49281 568 aa10.12□□□□□ -0.79
CUX1-203ENST00000360264 ADCK1Q86TW2 530 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms