RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 B3GAT3O94766 335 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 MYOGP15173 224 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 LAG3P18627 525 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 SLC9A1P19634 815 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 PBX1P40424 430 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 ALDH7A1P49419 539 aaKnown RBP13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 AARSP49588 968 aaKnown RBP eCLIP13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 MYO1EQ12965 1108 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 FAXDC2Q96IV6 333 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 TRIM5Q9C035 493 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 INTS2Q9H0H0 1204 aaKnown RBP13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 GCNT4Q9P109 453 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 TMEM265A0A087WTH1 108 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 SPTLC1O15269 473 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 TPM3P06753 285 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 TAF6P49848 677 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 SYCP1Q15431 976 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 WDR44Q5JSH3 913 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 SPOUT1Q5T280 376 aaKnown RBP13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 TRIM65Q6PJ69 517 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 COLGALT1Q8NBJ5 622 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 MAFAQ8NHW3 353 aaPredicted RBP13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 TATDN2Q93075 761 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 ZNF558Q96NG5 402 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 APOBEC3GQ9HC16 384 aaKnown RBP13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 SIX2Q9NPC8 291 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 MARCH5Q9NX47 278 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 GDAP2Q9NXN4 497 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 PRG3Q9Y2Y8 225 aaPredicted RBP13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 NUB1Q9Y5A7 615 aa13.33□□□□□ -0.28
NIF3L1-201ENST00000359683 LINC01553A4QN01 128 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 KPNA7A9QM74 516 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 NT5C1B-RDH14C9J2C7 533 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 F8W810 466 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 KIF4AO95239 1232 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 EFEMP2O95967 443 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 ITGB1P05556 798 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 FOSL2P15408 326 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 DNAJB2P25686 324 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 PBX3P40426 434 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 ZNF75DP51815 510 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 NOP14P78316 857 aaKnown RBP13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 ZNF699Q32M78 642 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 WDR72Q3MJ13 1102 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 SV2CQ496J9 727 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 TIGD5Q53EQ6 642 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 SPOPLQ6IQ16 392 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 SLC39A11Q8N1S5 342 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 CCDC150Q8NCX0 1101 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 NT5C1BQ96P26 610 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 PBX4Q9BYU1 374 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 IMPG2Q9BZV3 1241 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 PLCB1Q9NQ66 1216 aa13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 YBX2Q9Y2T7 364 aaKnown RBP13.32□□□□□ -0.28
NIF3L1-201ENST00000359683 TADA2AO75478 443 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 ARHGEF15O94989 841 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 BMPR1AP36894 532 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 PBX2P40425 430 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 KLK7P49862 253 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 MRE11P49959 708 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 RAB30Q15771 203 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 PTPN21Q16825 1174 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 ZNF667Q5HYK9 610 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 KLHDC7AQ5VTJ3 777 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 PHLDB3Q6NSJ2 640 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 LIMS2Q7Z4I7 341 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 TMEM173Q86WV6 379 aaPredicted RBP13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 BCL7CQ8WUZ0 217 aaPredicted RBP13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 ELMO3Q96BJ8 720 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 MRFAP1L1Q96HT8 127 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 IGSF21Q96ID5 467 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 SUSD3Q96L08 255 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 LSM14BQ9BX40 385 aaKnown RBP13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 COL25A1Q9BXS0 654 aaPredicted RBP13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 SPG21Q9NZD8 308 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 MSRAQ9UJ68 235 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 ADAM28Q9UKQ2 775 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 PCDHB12Q9Y5F1 795 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 MYO9BQ13459 2157 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 M0QZQ0 153 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 NOL4O94818 638 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 CA3P07451 260 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 FAM163BP0C2L3 166 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 BRCC3P46736 316 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 APBA1Q02410 837 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 LRMPQ12912 555 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 DPH6Q7L8W6 267 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 HASPINQ8TF76 798 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 SENP8Q96LD8 212 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 NXF1Q9UBU9 619 aaKnown RBP13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 APEX2Q9UBZ4 518 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 RWDD3Q9Y3V2 267 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 SNX9Q9Y5X1 595 aa13.31□□□□□ -0.28
NIF3L1-201ENST00000359683 UNC80Q8N2C7 3258 aa13.3□□□□□ -0.28
NIF3L1-201ENST00000359683 CDH23Q9H251 3354 aa13.3□□□□□ -0.28
NIF3L1-201ENST00000359683 C5orf67F2Z3F1 127 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms