RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 BUB1BO60566 1050 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 MYCP01106 439 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 HOXC6P09630 235 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 STAG3L1P0CL83 205 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 MARCKSL1P49006 195 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 SLC26A2P50443 739 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CDH8P55286 799 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 PRKCZQ05513 592 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 MCL1Q07820 350 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF211Q13398 564 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 TFDP1Q14186 410 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 MFSD10Q14728 455 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 WDR44Q5JSH3 913 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 GLRA4Q5JXX5 417 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 NAA35Q5VZE5 725 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 AP1ARQ63HQ0 302 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 IQSEC1Q6DN90 963 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 JADE1Q6IE81 842 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 MPZL3Q6UWV2 235 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CXCL17Q6UXB2 119 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 BRSK2Q8IWQ3 736 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 LINC01465Q8N7H1 131 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 TPCN2Q8NHX9 752 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 TMEM40Q8WWA1 233 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 TRIB2Q92519 343 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 EIF2AQ9BY44 585 aaKnown RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 ZFYVE28Q9HCC9 887 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 PTPRHQ9HD43 1115 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 RYDENQ9NUL5 291 aaKnown RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CPSF3Q9UKF6 684 aaKnown RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 TLL2Q9Y6L7 1015 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 SCN1AP35498 2009 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CITO14578 2027 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 HMGB1P1B2RPK0 211 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 TSPAN1O60635 241 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 PPFIA2O75334 1257 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CYP2C9P11712 490 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 MAGEA9P43362 315 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 PHKA2P46019 1235 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 FLT3LGP49771 235 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 PDE6CP51160 858 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 VSNL1P62760 191 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 ADCY2Q08462 1091 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CUL2Q13617 745 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 WHAMMP3Q1A5X7 153 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 DNAJC21Q5F1R6 531 aaKnown RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 ZPBP2Q6X784 338 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 DPH6Q7L8W6 267 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CEP112Q8N8E3 955 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 LRRC57Q8N9N7 239 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 PPM1EQ8WY54 764 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CTNNBL1Q8WYA6 563 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 DDX1Q92499 740 aaKnown RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 USP6NLQ92738 828 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 EMID1Q96A84 441 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CYFIP2Q96F07 1278 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 AP1M1Q9BXS5 423 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 OSBPL7Q9BZF2 842 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 C2orf40Q9H1Z8 148 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 KIAA1586Q9HCI6 787 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 LUC7LQ9NQ29 371 aaKnown RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 ST7Q9NRC1 585 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 RBM12Q9NTZ6 932 aaKnown RBP5.44□□□□□ -1.54
ATXN3-202ENST00000359366 FAM53CQ9NYF3 392 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 KLK14Q9P0G3 267 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CTTNBP2NLQ9P2B4 639 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 CACNG4Q9UBN1 327 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 HMGXB4Q9UGU5 601 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 PCDHGC5Q9Y5F6 944 aa5.44□□□□□ -1.54
ATXN3-202ENST00000359366 ZSCAN5CA6NGD5 496 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 A6NJR5 290 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 PPEF2O14830 753 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 ERLIN2O94905 339 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 NPTXRO95502 500 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 ITGB3P05106 788 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 CLTAP09496 248 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 CTSHP09668 335 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 TMEM191BP0C7N4 346 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 H2AFXP16104 143 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 ACO1P21399 889 aaKnown RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 PROZP22891 400 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 AKAP5P24588 427 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 TMOD1P28289 359 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 GTF2H1P32780 548 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 RGS2P41220 211 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 RWDD2BP57060 319 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 CLDN10P78369 228 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 MESDQ14696 234 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 FSCN1Q16658 493 aaKnown RBP5.43□□□□□ -1.54
ATXN3-202ENST00000359366 GNASQ5JWF2 1037 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 MEI1Q5TIA1 1274 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 CCDC181Q5TID7 509 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 PEX26Q7Z412 305 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 USP37Q86T82 979 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 CXorf38Q8TB03 319 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 WNT8BQ93098 351 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF653Q96CK0 615 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 APBA2Q99767 749 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 SH3GL3Q99963 347 aa5.43□□□□□ -1.54
ATXN3-202ENST00000359366 ZSWIM1Q9BR11 485 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms