RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 RGS2P41220 211 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 CDR1P51861 262 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 GRIK3Q13003 919 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 MFSD10Q14728 455 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 C1QTNF12Q5T7M4 302 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 ARMC3Q5W041 872 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 JADE1Q6IE81 842 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 AADACL2Q6P093 401 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 KCNN1Q92952 543 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 APBA2Q99767 749 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 RBM12Q9NTZ6 932 aaKnown RBP13.51□□□□□ -0.25
GGPS1-202ENST00000358966 CTTNBP2NLQ9P2B4 639 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 FAN1Q9Y2M0 1017 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 PPME1Q9Y570 386 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 MAGEB2O15479 319 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 COQ9O75208 318 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 GJB6O95452 261 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 MARCKSL1P49006 195 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 CDH8P55286 799 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 PRKCZQ05513 592 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 GLRA4Q5JXX5 417 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 CCDC181Q5TID7 509 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 RFFLQ8WZ73 363 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 EIF2AQ9BY44 585 aaKnown RBP13.5□□□□□ -0.25
GGPS1-202ENST00000358966 PRMT7Q9NVM4 692 aaPredicted RBP13.5□□□□□ -0.25
GGPS1-202ENST00000358966 TNFSF13BQ9Y275 285 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 TMEM253P0C7T8 217 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 CYP2C9P11712 490 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 ELNP15502 786 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 FLT3LGP49771 235 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 CDR2Q01850 454 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 MTA1Q13330 715 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 C10orf76Q5T2E6 689 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 NAA35Q5VZE5 725 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 PEX26Q7Z412 305 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 ADAT2Q7Z6V5 191 aaKnown RBP13.5□□□□□ -0.25
GGPS1-202ENST00000358966 WDR49Q8IV35 697 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 GPR161Q8N6U8 529 aaKnown RBP13.5□□□□□ -0.25
GGPS1-202ENST00000358966 CYFIP2Q96F07 1278 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 SH3GL3Q99963 347 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 APOL6Q9BWW8 343 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 RPF1Q9H9Y2 349 aaKnown RBP13.5□□□□□ -0.25
GGPS1-202ENST00000358966 SIX4Q9UIU6 781 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 CITO14578 2027 aa13.5□□□□□ -0.25
GGPS1-202ENST00000358966 ANKRD62A6NC57 917 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 KIAA0391O15091 583 aaKnown RBP13.49□□□□□ -0.25
GGPS1-202ENST00000358966 HTRA3P83110 453 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 ZNF211Q13398 564 aaPredicted RBP13.49□□□□□ -0.25
GGPS1-202ENST00000358966 DUOXA2Q1HG44 320 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 LONRF2Q1L5Z9 754 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 SLC10A6Q3KNW5 377 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 CXCL17Q6UXB2 119 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 EXOC8Q8IYI6 725 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 C1orf127Q8N9H9 656 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 RBBP8NLQ8NC74 664 aaPredicted RBP13.49□□□□□ -0.25
GGPS1-202ENST00000358966 SPATA4Q8NEY3 305 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 ZNF653Q96CK0 615 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 ZNF236Q9UL36 1845 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 ZSCAN5CA6NGD5 496 aaPredicted RBP13.49□□□□□ -0.25
GGPS1-202ENST00000358966 KIF4AO95239 1232 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 ASS1P00966 412 aaKnown RBP13.49□□□□□ -0.25
GGPS1-202ENST00000358966 ITGB3P05106 788 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 RPS6KA1Q15418 735 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 FSCN1Q16658 493 aaKnown RBP13.49□□□□□ -0.25
GGPS1-202ENST00000358966 NT5DC3Q86UY8 548 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 ZSWIM1Q9BR11 485 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 FAM107BQ9H098 131 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 ISCUQ9H1K1 167 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 HMGXB4Q9UGU5 601 aa13.49□□□□□ -0.25
GGPS1-202ENST00000358966 ASAP2O43150 1006 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 ZEB2O60315 1214 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 GPR32O75388 356 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 NPTXRO95502 500 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 TCP1P17987 556 aaKnown RBP13.48□□□□□ -0.25
GGPS1-202ENST00000358966 IBSPP21815 317 aaPredicted RBP13.48□□□□□ -0.25
GGPS1-202ENST00000358966 GNA15P30679 374 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 TRPC3Q13507 836 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 MESDQ14696 234 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 CRYMQ14894 314 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 ZNF699Q32M78 642 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 LRRC1Q9BTT6 524 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 AP1M1Q9BXS5 423 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 XYLT2Q9H1B5 865 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 ADAMTS10Q9H324 1103 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 CD248Q9HCU0 757 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 SPATS2LQ9NUQ6 558 aaKnown RBP13.48□□□□□ -0.25
GGPS1-202ENST00000358966 SCN1AP35498 2009 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 NCANO14594 1321 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 CEP104O60308 925 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 HOXA11P31270 313 aaPredicted RBP13.48□□□□□ -0.25
GGPS1-202ENST00000358966 RDXP35241 583 aaKnown RBP13.48□□□□□ -0.25
GGPS1-202ENST00000358966 PSEN2P49810 448 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 WDR72Q3MJ13 1102 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 DCAF12L1Q5VU92 463 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 KRT35Q92764 455 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 IMPG2Q9BZV3 1241 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 DMGDHQ9UI17 866 aaKnown RBP13.48□□□□□ -0.25
GGPS1-202ENST00000358966 COL1A2P08123 1366 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 TMEM88BA6NKF7 163 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 BTNL10A8MVZ5 291 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms