RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 THTPAQ9BU02 230 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 RSAD1Q9HA92 442 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 RGSL1A5PLK6 1076 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SFI1A8K8P3 1242 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 DNAJA2O60884 412 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 BMP6P22004 513 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ARFIP2P53365 341 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 DNAJC24Q6P3W2 148 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SLC26A11Q86WA9 606 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 CHSY1Q86X52 802 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF354CQ86Y25 554 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 CXorf38Q8TB03 319 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 GDAQ9Y2T3 454 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MYO18AQ92614 2054 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MST1RQ04912 1400 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 METP08581 1390 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ROBO3Q96MS0 1386 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 TMEM110-MUSTN1A8MSY1 372 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 TNPO2O14787 897 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SLC12A2P55011 1212 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PDK2Q15119 407 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PROSER3Q2NL68 480 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 NLRP9Q7RTR0 991 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 HDDC2Q7Z4H3 204 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 STON2Q8WXE9 905 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PBXIP1Q96AQ6 731 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 DISP2A7MBM2 1401 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ANXA1P04083 346 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PPM1KQ8N3J5 372 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ZC3H12CQ9C0D7 883 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 DCP1AQ9NPI6 582 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ANAPC7Q9UJX3 599 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 TLK1Q9UKI8 766 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ERBB2P04626 1255 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SLCO1A2P46721 670 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PURAQ00577 322 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 RABGAP1LQ5R372 815 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 RAB44Q7Z6P3 723 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ERP27Q96DN0 273 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 XPOTO43592 962 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 RFC1P35251 1148 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 NLRX1Q86UT6 975 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ADAM22Q9P0K1 906 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 KDM1AO60341 852 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 IL1BP01584 269 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 FAM58BPP0C7Q3 252 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PRR29P0C7W0 189 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 GNAT1P11488 350 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 GCNT1Q02742 428 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 KCNMA1Q12791 1236 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ASTE1Q2TB18 679 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MRPL1Q9BYD6 325 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ITGA11Q9UKX5 1188 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 THRAP3Q9Y2W1 955 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PPLO60437 1756 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 JAK3P52333 1124 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 CAMK1DQ8IU85 385 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 LRRC34Q8IZ02 419 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TMEM174Q8WUU8 243 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 SYNDIG1Q9H7V2 258 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 GAKO14976 1311 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 FAM170AA1A519 330 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 PDHA1P08559 390 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 AOC1P19801 751 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 C12orf56Q8IXR9 622 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 LENG1Q96BZ8 264 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 GREM2Q9H772 168 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 STXBP5LQ9Y2K9 1186 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 H0Y3Z8 333 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 NCAM2O15394 837 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 NPM3O75607 178 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ENOPH1Q9UHY7 261 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 NIP7Q9Y221 180 aaKnown RBP eCLIP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 PPRC1Q5VV67 1664 aaKnown RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 NPHP4O75161 1426 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ALADP13716 330 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 FDFT1P37268 417 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ATN1P54259 1190 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TOP3AQ13472 1001 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 P3H1Q32P28 736 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TMCO4Q5TGY1 634 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 BORAQ6PGQ7 559 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 THNSL1Q8IYQ7 743 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 FAM71AQ8IYT1 594 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ETNPPLQ8TBG4 499 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 BAP1Q92560 729 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 BDH2Q9BUT1 245 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 MPP6Q9NZW5 540 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 SLC8A2Q9UPR5 921 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 A0A087X0T9 212 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 BAIAP3O94812 1187 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 FAM228BP0C875 321 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 RXRBP28702 533 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 CYP4F22Q6NT55 531 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 MAPKAPK5Q8IW41 473 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 TBC1D22BQ9NU19 505 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ADAM28Q9UKQ2 775 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 ZMYM2Q9UBW7 1377 aa4.31□□□□□ -1.72
SYNE2-204ENST00000358025 DDX3XO00571 662 aaKnown RBP eCLIP4.31□□□□□ -1.72
SYNE2-204ENST00000358025 CYP1A2P05177 515 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms