RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 WHRNQ9P202 907 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 HEY2Q9UBP5 337 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZNF711Q9Y462 761 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 GPR75-ASB3A0A0A6YYF3 556 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 CTCFP49711 727 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 PTENP60484 403 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 OVGP1Q12889 678 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 NFX1Q12986 1120 aaKnown RBP16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 XKR3Q5GH77 459 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 SH3RF1Q7Z6J0 888 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 MSL3Q8N5Y2 521 aaKnown RBP16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 KIFC3Q9BVG8 833 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 DONSONQ9NYP3 566 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 GZMAP12544 262 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 SNRPFP62306 86 aaKnown RBP16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 RCN1Q15293 331 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 EFHC2Q5JST6 749 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 DCLRE1BQ9H816 532 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 IRAK4Q9NWZ3 460 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 MYO3BQ8WXR4 1341 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 AKAP3O75969 853 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 ENO3P13929 434 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 GFM2Q969S9 779 aaKnown RBP16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 PAK5Q9P286 719 aa16.39■□□□□ 0.21
TRAPPC11-202ENST00000357207 MAP2P11137 1827 aaKnown RBP16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 LOC100653049A0A140TA62 436 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 SYCE1LA8MT33 242 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 ATP9BO43861 1147 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 KRT34O76011 436 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 FGFR2P21802 821 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 ZNF844Q08AG5 666 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 TSTA3Q13630 321 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 LRRC8EQ6NSJ5 796 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 RSPH3Q86UC2 560 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 PPIL6Q8IXY8 311 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 PGBD4Q96DM1 585 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 THAP11Q96EK4 314 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 PDE2AO00408 941 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 POTEAQ6S8J7 498 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 KIRREL3Q8IZU9 778 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 PRPF31Q8WWY3 499 aaKnown RBP16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 PI4K2AQ9BTU6 479 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 RUSC1Q9BVN2 902 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 JPH1Q9HDC5 661 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 FRMPD1Q5SYB0 1578 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 PPP1R12AO14974 1030 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 PJA2O43164 708 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 IL10P22301 178 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 SLC20A2Q08357 652 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 PRPF39Q86UA1 669 aaKnown RBP16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 BEST2Q8NFU1 509 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 NAF1Q96HR8 494 aaKnown RBP16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 HIC2Q96JB3 615 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 GRID1Q9ULK0 1009 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 ADGRB2O60241 1585 aa16.38■□□□□ 0.21
TRAPPC11-202ENST00000357207 ARHGEF37A1IGU5 675 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 ATP6V1G2O95670 118 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 GIT2Q14161 759 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 TMC3Q7Z5M5 1100 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 CCDC90BQ9GZT6 254 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 PDP2Q9P2J9 529 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 A0A0U1RQJ8 604 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 NEMP1O14524 444 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 C21orf2O43822 256 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 CASP7P55210 303 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 SGSM1Q2NKQ1 1148 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 RNF135Q8IUD6 432 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 RNF149Q8NC42 400 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 EME1Q96AY2 570 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 MAGEB5Q9BZ81 275 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 RSAD1Q9HA92 442 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 CNOT7Q9UIV1 285 aaKnown RBP16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 A8MXQ7 604 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 TRIM49D1C9J1S8 452 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 MSH4O15457 936 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 SGPL1O95470 568 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 DNAAF5Q86Y56 855 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 RTKN2Q8IZC4 609 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 NCLNQ969V3 563 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 MAGEA13PA6NCF6 341 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 FSBPO95073 299 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 SYF2O95926 243 aaKnown RBP16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 SERPINB3P29508 390 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 ARHGDIAP52565 204 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 LRRC6Q86X45 466 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 OR6P1Q8NGX9 317 aa16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 EIF2AQ9BY44 585 aaKnown RBP16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 STX18Q9P2W9 335 aaKnown RBP16.37■□□□□ 0.21
TRAPPC11-202ENST00000357207 ATP8B3O60423 1300 aa16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 AIM2O14862 343 aa16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 KPNB1Q14974 876 aaKnown RBP16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 APLFQ8IW19 511 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 TMEM143Q96AN5 459 aa16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 FAM111AQ96PZ2 611 aa16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 CCDC134Q9H6E4 229 aa16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 GDF3Q9NR23 364 aa16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 TCRBV5S4A2TA0A5A2 114 aa16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 PLA2G4FQ68DD2 849 aa16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 CDC42EP5Q6NZY7 148 aa16.36■□□□□ 0.21
TRAPPC11-202ENST00000357207 RXFP1Q9HBX9 757 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms