RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 KMT5AQ9NQR1 393 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 TBK1Q9UHD2 729 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ERI2A8K979 691 aaKnown RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CPA3P15088 417 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PLS1Q14651 629 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 SAMD4BQ5PRF9 694 aaKnown RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PNPT1Q8TCS8 783 aaKnown RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CLIC6Q96NY7 704 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CCDC90BQ9GZT6 254 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 KCNK4Q9NYG8 393 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF197O14709 1029 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 FDFT1P37268 417 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 TMEM179Q6ZVK1 233 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 DDX42Q86XP3 938 aaKnown RBP eCLIP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 RFWD2Q8NHY2 731 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PAGR1Q9BTK6 254 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 GINM1Q9NU53 330 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ATXN10Q9UBB4 475 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 SNX24Q9Y343 169 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 KDM6AO15550 1401 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PECAM1P16284 738 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CTDSPL2Q05D32 466 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 STKLD1Q8NE28 680 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 TP53INP1Q96A56 240 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF577Q9BSK1 485 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 TRIM49P0CI25 452 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 TRIM49CP0CI26 452 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 SLC2A3P11169 496 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CCDC130P13994 396 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 GARTP22102 1010 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 KIF19Q2TAC6 998 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 SEPT1Q8WYJ6 367 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF496Q96IT1 587 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 RAD54BQ9Y620 910 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 AK5Q9Y6K8 562 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CXCR5P32302 372 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PDK2Q15119 407 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PPIL6Q8IXY8 311 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ENGASEQ8NFI3 743 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 NCLNQ969V3 563 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 LY9Q9HBG7 655 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 HDAC6Q9UBN7 1215 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 MYO9AB2RTY4 2548 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 BNC2Q6ZN30 1099 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 MICU2Q8IYU8 434 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ZSWIM1Q9BR11 485 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 GYPCP04921 128 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ANXA6P08133 673 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 FAM200BP0CF97 657 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PRELPP51888 382 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PTENP60484 403 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CDK16Q00536 496 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 SPIDRQ14159 915 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ANO4Q32M45 955 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 TTC39BQ5VTQ0 682 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 IZUMO3Q5VZ72 239 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 LONP2Q86WA8 852 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 LEMD2Q8NC56 503 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 STRBPQ96SI9 672 aaKnown RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 COG4Q9H9E3 785 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 NCKIPSDQ9NZQ3 722 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CNOT8Q9UFF9 292 aaKnown RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 SAP30BPQ9UHR5 308 aaKnown RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 NSFL1CQ9UNZ2 370 aaKnown RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 TULP2O00295 520 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ANXA1P04083 346 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ATP1A1P05023 1023 aaKnown RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 RBP1P09455 135 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CYP2C9P11712 490 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PARP6Q2NL67 630 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 OTUD7BQ6GQQ9 843 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 TRAF7Q6Q0C0 670 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 SLC22A9Q8IVM8 553 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 JARID2Q92833 1246 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 LRRC1Q9BTT6 524 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ASCC2Q9H1I8 757 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF711Q9Y462 761 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CARNS1A5YM72 827 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 CFLARO15519 480 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 SNX2O60749 519 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ACTR2P61160 394 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 NCF4Q15080 339 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 FBXW10Q5XX13 1052 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 LRRC8DQ7L1W4 858 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 SIRT2Q8IXJ6 389 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PI4KBQ9UBF8 816 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 FAM153AQ9UHL3 310 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 DTNAQ9Y4J8 743 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PCDHB6Q9Y5E3 794 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 GLI2P10070 1586 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 NRKQ7Z2Y5 1582 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 MATN2O00339 956 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ANP32DO95626 131 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 BCL10O95999 233 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 KCNA6P17658 529 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ATP6V1C1P21283 382 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 GRIK1P39086 918 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF200P98182 395 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 TTLL12Q14166 644 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-202ENST00000357162 PPP6R3Q5H9R7 873 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms