RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 TXNRD3Q86VQ6 643 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 TRIM59Q8IWR1 403 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 ATP11CQ8NB49 1132 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 F5H5T6 163 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 DDNO94850 711 aaPredicted RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 AVPR1AP37288 418 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 ZNF438Q7Z4V0 828 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 PATL1Q86TB9 770 aaKnown RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 MFAP3LO75121 409 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 PAX3P23760 479 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 NCKAP1LP55160 1127 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 EIF3EP60228 445 aaKnown RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 IKBKEQ14164 716 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 TTLL9Q3SXZ7 439 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 IQSEC1Q6DN90 963 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 AGBL1Q96MI9 1066 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 NDE1Q9NXR1 346 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 GTSE1Q9NYZ3 720 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 ESRRGP62508 458 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 STARD3Q14849 445 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 UHMK1Q8TAS1 419 aaKnown RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 DACT3Q96B18 629 aaPredicted RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 TSEN34Q9BSV6 310 aaKnown RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 CINPQ9BW66 212 aaPredicted RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 UVRAGQ9P2Y5 699 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 EEF2KO00418 725 aaKnown RBP11.83□□□□□ -0.51
FN1-204ENST00000356005 ENC1O14682 589 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 DCTN3O75935 186 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 KRT16P08779 473 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 PRR29P0C7W0 189 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 IGDCC4Q8TDY8 1250 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 RFFLQ8WZ73 363 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 NCLNQ969V3 563 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 KIFC3Q9BVG8 833 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 WDCPQ9H6R7 721 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 TLR8Q9NR97 1041 aaKnown RBP11.83□□□□□ -0.51
FN1-204ENST00000356005 KLHL11Q9NVR0 708 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 PSD3Q9NYI0 1048 aa11.83□□□□□ -0.51
FN1-204ENST00000356005 A0A1W2PQC6 194 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 GOLGA8TH3BQL2 631 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 KCNN4O15554 427 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 SYF2O95926 243 aaKnown RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 ATP1A2P50993 1020 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 KCNA1Q09470 495 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 EDRF1Q3B7T1 1238 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 CHSY1Q86X52 802 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 GLYCTKQ8IVS8 523 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 TRAIPQ9BWF2 469 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 UBXN6Q9BZV1 441 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 MYH15Q9Y2K3 1946 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 KRT87PA6NCN2 255 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 OPHN1O60890 802 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 PYGBP11216 843 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 GNGT1P63211 74 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 PPIL2Q13356 520 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 AGPAT1Q99943 283 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 TRPM5Q9NZQ8 1165 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 CDV3Q9UKY7 258 aaKnown RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 PACSIN2Q9UNF0 486 aaPredicted RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 APOBEC2Q9Y235 224 aaKnown RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 PCDHB2Q9Y5E7 798 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 SOWAHDA6NJG2 315 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 GTF2H1P32780 548 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 VCPP55072 806 aaKnown RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 SP3Q02447 781 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 TRIP13Q15645 432 aaPredicted RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 MAML1Q92585 1016 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 MKNK1Q9BUB5 465 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 U2AF2P26368 475 aaKnown RBP eCLIP11.83□□□□□ -0.523e-9■■■□□ 15.9
FN1-204ENST00000356005 HMOX2P30519 316 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 FMO5P49326 533 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 PAN2Q504Q3 1202 aaKnown RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 PXMP2Q9NR77 195 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 HDAC6Q9UBN7 1215 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 TBX20Q9UMR3 447 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 SYNPO2Q9UMS6 1093 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 CFAP69A5D8W1 941 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 ATP1A1P05023 1023 aaKnown RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 GFAPP14136 432 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 IL1R1P14778 569 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 HSP90AA5PQ58FG0 334 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 PTRHD1Q6GMV3 140 aaKnown RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 TIGD7Q6NT04 549 aaPredicted RBP11.83□□□□□ -0.52
FN1-204ENST00000356005 NFRKBQ6P4R8 1299 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 SNF8Q96H20 258 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 REEP2Q9BRK0 252 aa11.83□□□□□ -0.52
FN1-204ENST00000356005 ASS1P00966 412 aaKnown RBP11.82□□□□□ -0.52
FN1-204ENST00000356005 HADHAP40939 763 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 METTL7BQ6UX53 244 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 PABPC5Q96DU9 382 aaKnown RBP11.82□□□□□ -0.52
FN1-204ENST00000356005 TRIM55Q9BYV6 548 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 NIF3L1Q9GZT8 377 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 JMJD4Q9H9V9 463 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 PTGISQ16647 500 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 CHADLQ6NUI6 762 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 PKN3Q6P5Z2 889 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 PHF20Q9BVI0 1012 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms