RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 PEX5P50542 639 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 FCGRTP55899 365 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 GJA9P57773 515 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 TNNC1P63316 161 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 PPP2R5EQ16537 467 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 KIZQ2M2Z5 673 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 JADE1Q6IE81 842 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 HDXQ7Z353 690 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 UBL4BQ8N7F7 174 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 SCLT1Q96NL6 688 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 TSPAN18Q96SJ8 248 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 NAP1L3Q99457 506 aaPredicted RBP11.24□□□□□ -0.61
PTPN2-203ENST00000353319 CYP3A43Q9HB55 503 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 ITGA11Q9UKX5 1188 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 PCDHGC3Q9UN70 934 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 PCDHA3Q9Y5H8 950 aa11.24□□□□□ -0.61
PTPN2-203ENST00000353319 CCDC66A2RUB6 948 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 TMEM88BA6NKF7 163 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 THAP12O43422 761 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 MGAMO43451 1857 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 CALCAP01258 141 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 MYL3P08590 195 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 PAEPP09466 180 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 COMTP21964 271 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 EIF4BP23588 611 aaKnown RBP11.23□□□□□ -0.61
PTPN2-203ENST00000353319 SLC1A1P43005 524 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 DNA2P51530 1060 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 PURAQ00577 322 aaKnown RBP11.23□□□□□ -0.61
PTPN2-203ENST00000353319 PTP4A2Q12974 167 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 HIC1Q14526 733 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 MESDQ14696 234 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 TMEM132DQ14C87 1099 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 FSCN1Q16658 493 aaKnown RBP11.23□□□□□ -0.61
PTPN2-203ENST00000353319 ZNF667Q5HYK9 610 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 LIN9Q5TKA1 542 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 NAA35Q5VZE5 725 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 PLEKHA7Q6IQ23 1121 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 C8orf74Q6P047 294 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 NOTUMQ6P988 496 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 SLC27A1Q6PCB7 646 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 TTC39CQ8N584 583 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 EIF1ADQ8N9N8 165 aaKnown RBP11.23□□□□□ -0.61
PTPN2-203ENST00000353319 CPA5Q8WXQ8 436 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 PPP1R16BQ96T49 567 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 ZSWIM1Q9BR11 485 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 UPF3AQ9H1J1 476 aaKnown RBP11.23□□□□□ -0.61
PTPN2-203ENST00000353319 CDHR5Q9HBB8 845 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 MRPL47Q9HD33 250 aaKnown RBP11.23□□□□□ -0.61
PTPN2-203ENST00000353319 STIM2Q9P246 746 aa11.23□□□□□ -0.61
PTPN2-203ENST00000353319 DMGDHQ9UI17 866 aaKnown RBP11.23□□□□□ -0.61
PTPN2-203ENST00000353319 C17orf102A2RUQ5 167 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 BHMG1C9JSJ3 638 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-203ENST00000353319 SASH3O75995 380 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 CYBAP13498 195 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 P4HA1P13674 534 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 HSPA6P17066 643 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 MMP8P22894 467 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 RRM1P23921 792 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 CTNNA1P35221 906 aaKnown RBP11.22□□□□□ -0.61
PTPN2-203ENST00000353319 CRYBB1P53674 252 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-203ENST00000353319 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-203ENST00000353319 RBP5P82980 135 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 ZBTB6Q15916 424 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 DCAF12L1Q5VU92 463 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 MFSD14CQ5VZR4 134 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 ALKAL1Q6UXT8 129 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 RUFY4Q6ZNE9 571 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 CATSPER4Q7RTX7 472 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 KRT222Q8N1A0 295 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 SMC1BQ8NDV3 1235 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 TRPV1Q8NER1 839 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 HDAC7Q8WUI4 952 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 ALG3Q92685 438 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 UBXN6Q9BZV1 441 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 FAM49AQ9H0Q0 323 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-203ENST00000353319 LHX5Q9H2C1 402 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 SLITRK6Q9H5Y7 841 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 GDF3Q9NR23 364 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 ADAM22Q9P0K1 906 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 LCMT1Q9UIC8 334 aa11.22□□□□□ -0.61
PTPN2-203ENST00000353319 ABT1Q9ULW3 272 aaKnown RBP11.22□□□□□ -0.61
PTPN2-203ENST00000353319 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
PTPN2-203ENST00000353319 KRIT1O00522 736 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 TREHO43280 583 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 ATMINO43313 823 aaPredicted RBP11.21□□□□□ -0.61
PTPN2-203ENST00000353319 MED7O43513 233 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
PTPN2-203ENST00000353319 ITGB3P05106 788 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 CFHP08603 1231 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 KRT19P08727 400 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 WEE2P0C1S8 567 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 PSMC4P43686 418 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 PLA2G4AP47712 749 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 LACTBP83111 547 aaPredicted RBP11.21□□□□□ -0.61
PTPN2-203ENST00000353319 BEX3Q00994 111 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 SNX17Q15036 470 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 WDR72Q3MJ13 1102 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 TAF2Q6P1X5 1199 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 IFT20Q8IY31 132 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 TMEM35BQ8NCS4 154 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms