RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TSC22D3Q99576 134 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 TSSK1BQ9BXA7 367 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 RTFDC1Q9BY42 306 aaPredicted RBP16.83■□□□□ 0.28
PTPN11-201ENST00000351677 NDE1Q9NXR1 346 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 USP15Q9Y4E8 981 aaPredicted RBP16.83■□□□□ 0.28
PTPN11-201ENST00000351677 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.83■□□□□ 0.28
PTPN11-201ENST00000351677 PREX1Q8TCU6 1659 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 E2F8A0AVK6 867 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 P4HA2O15460 535 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 CST8O60676 142 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 RECQLP46063 649 aaPredicted RBP16.83■□□□□ 0.28
PTPN11-201ENST00000351677 IRAK1P51617 712 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 ULK4Q96C45 1275 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 ANKEF1Q9NU02 776 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 PXDNQ92626 1479 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 E2F6O75461 281 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 GMPSP49915 693 aaPredicted RBP16.83■□□□□ 0.28
PTPN11-201ENST00000351677 C2CD6Q53TS8 623 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 C3orf62Q6ZUJ4 267 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 DDIASQ8IXT1 998 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 DEFB129Q9H1M3 183 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 FAM47DPA6NHR8 397 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 ARP10275 920 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 HSD17B4P51659 736 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 EARS2Q5JPH6 523 aaKnown RBP16.82■□□□□ 0.28
PTPN11-201ENST00000351677 TAS2R42Q7RTR8 314 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 ZBED2Q9BTP6 218 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 METTL5Q9NRN9 209 aaKnown RBP16.82■□□□□ 0.28
PTPN11-201ENST00000351677 PGM1P36871 562 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 HSD17B3P37058 310 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 ZNF200P98182 395 aaPredicted RBP16.82■□□□□ 0.28
PTPN11-201ENST00000351677 CAPRIN1Q14444 709 aaKnown RBP16.82■□□□□ 0.28
PTPN11-201ENST00000351677 FEZF2Q8TBJ5 459 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 MDM1Q8TC05 714 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 PRMT6Q96LA8 375 aaPredicted RBP16.82■□□□□ 0.28
PTPN11-201ENST00000351677 PCMTD2Q9NV79 361 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 GIT2Q14161 759 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 GANCQ8TET4 914 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 RMDN1Q96DB5 314 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 ANP32DO95626 131 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 EGFL8Q99944 293 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 YIPF3Q9GZM5 350 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 PMS1P54277 932 aaKnown RBP16.82■□□□□ 0.28
PTPN11-201ENST00000351677 ZNF235Q14590 738 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 SNX19Q92543 992 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 NIF3L1Q9GZT8 377 aa16.82■□□□□ 0.28
PTPN11-201ENST00000351677 KIF20BQ96Q89 1820 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 GH1P01241 217 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 KRT33BQ14525 404 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 MFSD14CQ5VZR4 134 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 CBWD2Q8IUF1 395 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 NT5C1AQ9BXI3 368 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 OSBPL1AQ9BXW6 950 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 LACRTQ9GZZ8 138 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 DEPDC5O75140 1603 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 NEMP1O14524 444 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 SNRPFP62306 86 aaKnown RBP16.81■□□□□ 0.28
PTPN11-201ENST00000351677 PTK7Q13308 1070 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 STYK1Q6J9G0 422 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 ACAD10Q6JQN1 1059 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 C1orf131Q8NDD1 294 aaKnown RBP16.81■□□□□ 0.28
PTPN11-201ENST00000351677 AFF4Q9UHB7 1163 aaKnown RBP16.81■□□□□ 0.28
PTPN11-201ENST00000351677 SLC4A7Q9Y6M7 1214 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 KCNA1Q09470 495 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 STILQ15468 1287 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 SPATA2LQ8IUW3 424 aaPredicted RBP16.81■□□□□ 0.28
PTPN11-201ENST00000351677 AGXT2Q9BYV1 514 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 ICAM1P05362 532 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 HNRNPLLQ8WVV9 542 aaKnown RBP16.81■□□□□ 0.28
PTPN11-201ENST00000351677 CYFIP2Q96F07 1278 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 NRBF2Q96F24 287 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.81■□□□□ 0.28
PTPN11-201ENST00000351677 F8W8V4 182 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 TAL1P17542 331 aaPredicted RBP16.81■□□□□ 0.28
PTPN11-201ENST00000351677 EEF1DP29692 281 aaKnown RBP16.81■□□□□ 0.28
PTPN11-201ENST00000351677 DEUP1Q05D60 604 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 RBBP7Q16576 425 aa16.81■□□□□ 0.28
PTPN11-201ENST00000351677 RNF103-CHMP3A0A140T963 221 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 MAFGO15525 162 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 TMED1Q13445 227 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 ANO4Q32M45 955 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 DNAAF5Q86Y56 855 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 DTX3LQ8TDB6 740 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 NDFIP2Q9NV92 336 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 IL18RAPO95256 599 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 CASP7P55210 303 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 GOLGA7BQ2TAP0 167 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 CDKAL1Q5VV42 579 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 SLC13A5Q86YT5 568 aaPredicted RBP16.8■□□□□ 0.28
PTPN11-201ENST00000351677 FAM71DQ8N9W8 422 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 IL17RAQ96F46 866 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 CBWD1Q9BRT8 395 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 PLA2G4AP47712 749 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 ACCSLQ4AC99 568 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 SZRD1Q7Z422 152 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 PPHLN1Q8NEY8 458 aaKnown RBP16.8■□□□□ 0.28
PTPN11-201ENST00000351677 ZKSCAN4Q969J2 545 aaPredicted RBP16.8■□□□□ 0.28
PTPN11-201ENST00000351677 PYGBP11216 843 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 PDCD2Q16342 344 aaPredicted RBP16.8■□□□□ 0.28
PTPN11-201ENST00000351677 LONP2Q86WA8 852 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms