RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 APBB1IPQ7Z5R6 666 aaPredicted RBP17.24■□□□□ 0.35
COPE-202ENST00000349893 TMC8Q8IU68 726 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 DEPTORQ8TB45 409 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 ZC3H10Q96K80 434 aaKnown RBP17.24■□□□□ 0.35
COPE-202ENST00000349893 ZMAT2Q96NC0 199 aaKnown RBP17.24■□□□□ 0.35
COPE-202ENST00000349893 NACC1Q96RE7 527 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 MKNK1Q9BUB5 465 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 TM6SF1Q9BZW5 370 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 SH2B1Q9NRF2 756 aaPredicted RBP17.24■□□□□ 0.35
COPE-202ENST00000349893 WASF3Q9UPY6 502 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 NBEAQ8NFP9 2946 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 KIF26AQ9ULI4 1882 aaPredicted RBP17.23■□□□□ 0.35
COPE-202ENST00000349893 WNT7AO00755 349 aa17.23■□□□□ 0.35
COPE-202ENST00000349893 EPB41L2O43491 1005 aaKnown RBP17.23■□□□□ 0.35
COPE-202ENST00000349893 NEMFO60524 1076 aa17.23■□□□□ 0.35
COPE-202ENST00000349893 MED24O75448 989 aa17.23■□□□□ 0.35
COPE-202ENST00000349893 TXKP42681 527 aa17.23■□□□□ 0.35
COPE-202ENST00000349893 IRX6P78412 446 aaPredicted RBP17.23■□□□□ 0.35
COPE-202ENST00000349893 PADI6Q6TGC4 694 aa17.23■□□□□ 0.35
COPE-202ENST00000349893 YAF2Q8IY57 180 aa17.23■□□□□ 0.35
COPE-202ENST00000349893 CEP120Q8N960 986 aa17.23■□□□□ 0.35
COPE-202ENST00000349893 LRRC3BQ96PB8 259 aa17.23■□□□□ 0.35
COPE-202ENST00000349893 LARP6Q9BRS8 491 aaKnown RBP17.23■□□□□ 0.35
COPE-202ENST00000349893 POLR3CQ9BUI4 534 aaPredicted RBP17.23■□□□□ 0.35
COPE-202ENST00000349893 PTPRHQ9HD43 1115 aa17.23■□□□□ 0.35
COPE-202ENST00000349893 OBP2AQ9NY56 170 aa17.23■□□□□ 0.35
COPE-202ENST00000349893 EML5Q05BV3 1969 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 RPP40O75818 363 aaKnown RBP17.22■□□□□ 0.35
COPE-202ENST00000349893 REC8O95072 547 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 VNN2O95498 520 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 WEE1P30291 646 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 KRT2P35908 639 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 YARSP54577 528 aaKnown RBP17.22■□□□□ 0.35
COPE-202ENST00000349893 CCDC6Q16204 474 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 ARHGAP29Q52LW3 1261 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 UNQ6494/PRO21346Q6UXR6 183 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 RNF19BQ6ZMZ0 732 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 KBTBD6Q86V97 674 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 ARID3BQ8IVW6 561 aaPredicted RBP17.22■□□□□ 0.35
COPE-202ENST00000349893 APPL2Q8NEU8 664 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 KIFC3Q9BVG8 833 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 CCDC94Q9BW85 323 aaPredicted RBP17.22■□□□□ 0.35
COPE-202ENST00000349893 TMEM121BQ9BXQ6 578 aaPredicted RBP17.22■□□□□ 0.35
COPE-202ENST00000349893 DNAJC25Q9H1X3 360 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 CDT1Q9H211 546 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 SLITRK6Q9H5Y7 841 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 CNTN3Q9P232 1028 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 YIPF1Q9Y548 306 aa17.22■□□□□ 0.35
COPE-202ENST00000349893 CITO14578 2027 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 A0A1W2PRU2 124 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 C1QTNF9BB2RNN3 333 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 EXTL3O43909 919 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 C1QTNF9P0C862 333 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 PON2Q15165 354 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 DDX12PQ92771 950 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 ACO2Q99798 780 aaKnown RBP17.21■□□□□ 0.35
COPE-202ENST00000349893 OXCT2Q9BYC2 517 aaPredicted RBP17.21■□□□□ 0.35
COPE-202ENST00000349893 VPS45Q9NRW7 570 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 GTSE1Q9NYZ3 720 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 ZMIZ1Q9ULJ6 1067 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 NUB1Q9Y5A7 615 aa17.21■□□□□ 0.35
COPE-202ENST00000349893 MEFVO15553 781 aaPredicted RBP17.2■□□□□ 0.34
COPE-202ENST00000349893 OAZ2O95190 189 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 CTDNEP1O95476 244 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 HOXB3P14651 431 aaPredicted RBP17.2■□□□□ 0.34
COPE-202ENST00000349893 LIG1P18858 919 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 RPA1P27694 616 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 MPLP40238 635 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 PLD1Q13393 1074 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 STXBP5Q5T5C0 1151 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 KIFAP3Q92845 792 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 IFT74Q96LB3 600 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
COPE-202ENST00000349893 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 PCDHB8Q9UN66 801 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 ITPR1Q14643 2758 aa17.2■□□□□ 0.34
COPE-202ENST00000349893 ARHGEF35A5YM69 484 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 M0QZQ0 153 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 ABLIM1O14639 778 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 PFKFB2O60825 505 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 CPB1P15086 417 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 MUTP22033 750 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 PROZP22891 400 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 PLCB2Q00722 1185 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
COPE-202ENST00000349893 ACAP1Q15027 740 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 PSAPL1Q6NUJ1 521 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 PKN3Q6P5Z2 889 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 GAREM2Q75VX8 874 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 HAUS6Q7Z4H7 955 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 FAM200AQ8TCP9 573 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 WASF1Q92558 559 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 C18orf25Q96B23 403 aaPredicted RBP17.19■□□□□ 0.34
COPE-202ENST00000349893 ZFYVE19Q96K21 471 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 TMEM60Q9H2L4 133 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 CRISPLD1Q9H336 500 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 BRMS1Q9HCU9 246 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 PHLPP2Q6ZVD8 1323 aa17.19■□□□□ 0.34
COPE-202ENST00000349893 TMEM8BA6NDV4 472 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms