RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 HOXC10Q9NYD6 342 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 STMN3Q9NZ72 180 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 GPRC5DQ9NZD1 345 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 DCTN4Q9UJW0 460 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 PCDHA13Q9Y5I0 950 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 UMODL1Q5DID0 1318 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 GSG1L2A8MUP6 293 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 ATP5DP30049 168 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 KRT2P35908 639 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 MLLT3P42568 568 aaPredicted RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 PLCB3Q01970 1234 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 RPS6KA1Q15418 735 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 GALNTL6Q49A17 601 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 PCNX4Q63HM2 1172 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 ELMSAN1Q6PJG2 1045 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 ADAT2Q7Z6V5 191 aaKnown RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 EXD1Q8NHP7 514 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 IGDCC4Q8TDY8 1250 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 PPP4R1Q8TF05 950 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 MED30Q96HR3 178 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 VPS35Q96QK1 796 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 CPVLQ9H3G5 476 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 NOL6Q9H6R4 1146 aaKnown RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 LY9Q9HBG7 655 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 CABP5Q9NP86 173 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 AMACRQ9UHK6 382 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 SOS2Q07890 1332 aaPredicted RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 SIPA1L3O60292 1781 aaPredicted RBP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 MAN1A2O60476 641 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 USP1O94782 785 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 KRT13P13646 458 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 CCNCP24863 283 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 TPTEP56180 551 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 TRIP10Q15642 601 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 OGFOD2Q6N063 350 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 PASD1Q8IV76 773 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 C12orf50Q8NA57 414 aaPredicted RBP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 NRG4Q8WWG1 115 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 SHCBP1LQ9BZQ2 653 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 MMRN2Q9H8L6 949 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 USP29Q9HBJ7 922 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 DDX28Q9NUL7 540 aaKnown RBP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 MAP3K20Q9NYL2 800 aaKnown RBP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 HEMK1Q9Y5R4 338 aaPredicted RBP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 INO80B-WBP1J3KQ70 363 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 PDE8AO60658 829 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 IL32P24001 234 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 THOP1P52888 689 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 CHRNDQ07001 517 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 TGFBIQ15582 683 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 UAP1Q16222 522 aaPredicted RBP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 TTC23LQ6PF05 361 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 PPP1R14CQ8TAE6 165 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 PLIN2Q99541 437 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 KLHL42Q9P2K6 505 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 STX18Q9P2W9 335 aaKnown RBP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 LRRIQ4A6NIV6 560 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 GIPC1O14908 333 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 BMP6P22004 513 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 ERFEQ4G0M1 354 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 SGO2Q562F6 1265 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 ZNF746Q6NUN9 644 aaPredicted RBP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 AAGABQ6PD74 315 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 ZC3H15Q8WU90 426 aaKnown RBP12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 OSBPL6Q9BZF3 934 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 TMEM60Q9H2L4 133 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 HMGXB4Q9UGU5 601 aa12.86□□□□□ -0.35
CTNNB1-201ENST00000349496 ESRRGP62508 458 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 IL9RQ01113 521 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 ARID5AQ03989 594 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 GNA13Q14344 377 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 CARTPTQ16568 116 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 TAF1BQ53T94 588 aaPredicted RBP12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 NXNQ6DKJ4 435 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 ACAD11Q709F0 780 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 AMIGO3Q86WK7 504 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 ECHDC2Q86YB7 292 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 DIS3L2Q8IYB7 885 aaKnown RBP12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 HACE1Q8IYU2 909 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 CDC26Q8NHZ8 85 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 CNBD2Q96M20 576 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 TCF12Q99081 682 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 TSG101Q99816 390 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 PI4KBQ9UBF8 816 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 SLC8A2Q9UPR5 921 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 TCRBV5S4A2TA0A5A2 114 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 KCNJ13O60928 360 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 AGTP01019 485 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 BRAFP15056 766 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 CENPAP49450 140 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 MORC3Q14149 939 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 MFSD6Q6ZSS7 791 aa12.85□□□□□ -0.35
CTNNB1-201ENST00000349496 ARHGEF18Q6ZSZ5 1173 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms