RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 KIF4AO95239 1232 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 TPM3P06753 285 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 C8AP07357 584 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 SPATA31C1P0DKV0 1188 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 CD72P21854 359 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 SDHBP21912 280 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 FCARP24071 287 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 IGFBP6P24592 240 aaPredicted RBP10.6□□□□□ -0.71
MRPL55-204ENST00000348259 YWHABP31946 246 aaKnown RBP10.6□□□□□ -0.71
MRPL55-204ENST00000348259 ZNF75DP51815 510 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 LMNB2Q03252 620 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 PSMD2Q13200 908 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 HSP90AA2PQ14568 343 aaPredicted RBP10.6□□□□□ -0.71
MRPL55-204ENST00000348259 ISM2Q6H9L7 571 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 FOXR2Q6PJQ5 311 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 CD300LGQ6UXG3 332 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 CATSPER3Q86XQ3 398 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 GLYCTKQ8IVS8 523 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 RABGGTAQ92696 567 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 TRIM44Q96DX7 344 aaPredicted RBP10.6□□□□□ -0.71
MRPL55-204ENST00000348259 HINFPQ9BQA5 517 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 RTKNQ9BST9 563 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 PLA2G2FQ9BZM2 168 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 HSD3B7Q9H2F3 369 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 BLZF1Q9H2G9 400 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 AVENQ9NQS1 362 aaPredicted RBP10.6□□□□□ -0.71
MRPL55-204ENST00000348259 SPATA6Q9NWH7 488 aaPredicted RBP10.6□□□□□ -0.71
MRPL55-204ENST00000348259 DNMT3BQ9UBC3 853 aaKnown RBP10.6□□□□□ -0.71
MRPL55-204ENST00000348259 RWDD2AQ9UIY3 292 aa10.6□□□□□ -0.71
MRPL55-204ENST00000348259 SF3B1O75533 1304 aaKnown RBP eCLIP10.59□□□□□ -0.712e-7■■■■■ 129.2
MRPL55-204ENST00000348259 FAM208BQ5VWN6 2430 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 NRG2O14511 850 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-204ENST00000348259 TBC1D4O60343 1298 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 MED24O75448 989 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 ECI2O75521 394 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 ERLIN2O94905 339 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 SLITRK3O94933 977 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 ZNF18P17022 549 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 GLRA2P23416 452 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 AKAP5P24588 427 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 CASP1P29466 404 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 PFKPQ01813 784 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 CSTF1Q05048 431 aaKnown RBP10.59□□□□□ -0.71
MRPL55-204ENST00000348259 EHHADHQ08426 723 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 TUSC3Q13454 348 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 RAB33AQ14088 237 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 MXD4Q14582 209 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-204ENST00000348259 ECM1Q16610 540 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 SLC5A9Q2M3M2 681 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 KMT5BQ4FZB7 885 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 SPATA1Q5VX52 437 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 PPP4R3CPQ6ZMV5 832 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 UNC13DQ70J99 1090 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 RTL10Q7L3V2 364 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 DHTKD1Q96HY7 919 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-204ENST00000348259 DYDC2Q96IM9 177 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 PLIN2Q99541 437 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 KXD1Q9BQD3 176 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 TTPALQ9BTX7 342 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 FAM126AQ9BYI3 521 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-204ENST00000348259 TRIM5Q9C035 493 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 CHRDQ9H2X0 955 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 BMP2KQ9NSY1 1161 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-204ENST00000348259 HCFC1R1Q9NWW0 138 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 NCDNQ9UBB6 729 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 KIAA1024Q9UPX6 916 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 DNM3Q9UQ16 869 aa10.59□□□□□ -0.71
MRPL55-204ENST00000348259 KIF26AQ9ULI4 1882 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-204ENST00000348259 MYMKA6NI61 221 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 GOLGA6L6A8MZA4 724 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 TMEM189-UBE2V1I3L0A0 370 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 CCL16O15467 120 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 EDN1P05305 212 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 CD44P16070 742 aaKnown RBP10.58□□□□□ -0.72
MRPL55-204ENST00000348259 FGFR3P22607 806 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 STIM1Q13586 685 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 DHX8Q14562 1220 aaKnown RBP10.58□□□□□ -0.72
MRPL55-204ENST00000348259 MCM6Q14566 821 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 UBXN2BQ14CS0 331 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 PSMD5Q16401 504 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 FAM187BQ17R55 369 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 PRSS36Q5K4E3 855 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 ZBTB41Q5SVQ8 909 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 CDCA2Q69YH5 1023 aaPredicted RBP10.58□□□□□ -0.72
MRPL55-204ENST00000348259 NCAPH2Q6IBW4 605 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 SLC27A1Q6PCB7 646 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 TSSK4Q6SA08 328 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 KCNK18Q7Z418 384 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 CDR2LQ86X02 465 aaPredicted RBP10.58□□□□□ -0.72
MRPL55-204ENST00000348259 SYT2Q8N9I0 419 aaPredicted RBP10.58□□□□□ -0.72
MRPL55-204ENST00000348259 ATRIPQ8WXE1 791 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 DNAJC19Q96DA6 116 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 MED15Q96RN5 788 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 NELL2Q99435 816 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 EIF2AK1Q9BQI3 630 aaKnown RBP10.58□□□□□ -0.72
MRPL55-204ENST00000348259 ZSWIM4Q9H7M6 989 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 KLK14Q9P0G3 267 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 MTRRQ9UBK8 725 aa10.58□□□□□ -0.72
MRPL55-204ENST00000348259 SPAG17Q6Q759 2223 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms