RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 ITGA11Q9UKX5 1188 aa24.02■■□□□ 1.44
TNFRSF10B-202ENST00000347739 TTC7AQ9ULT0 858 aaPredicted RBP24.02■■□□□ 1.44
TNFRSF10B-202ENST00000347739 GINS2Q9Y248 185 aa24.02■■□□□ 1.44
TNFRSF10B-202ENST00000347739 DERAQ9Y315 318 aa24.02■■□□□ 1.44
TNFRSF10B-202ENST00000347739 FAM170AA1A519 330 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 THAP12O43422 761 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 ATP8B1O43520 1251 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 ERLIN1O75477 346 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 ITGB3P05106 788 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 C6orf222P0C671 652 aaPredicted RBP24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 GLE1Q53GS7 698 aaKnown RBP24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 NAA35Q5VZE5 725 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 MON1BQ7L1V2 547 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 REM2Q8IYK8 340 aaPredicted RBP24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 C7orf31Q8N865 590 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 PPP1R13LQ8WUF5 828 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 ZNF606Q8WXB4 792 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CARD9Q9H257 536 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 PGRMC1O00264 195 aaKnown RBP24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 NPTXRO95502 500 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 STAU1O95793 577 aaKnown RBP24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 KRT19P08727 400 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 SNX17Q15036 470 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 PTPROQ16827 1216 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 PHF13Q86YI8 300 aaPredicted RBP24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CPA5Q8WXQ8 436 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.01■■□□□ 1.433e-10■■□□□ 12.4
TNFRSF10B-202ENST00000347739 MTG1Q9BT17 334 aaPredicted RBP24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 TRIP12Q14669 1992 aaPredicted RBP24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 SCN10AQ9Y5Y9 1956 aa24.01■■□□□ 1.43
TNFRSF10B-202ENST00000347739 MYADML2A6NDP7 307 aa24■■□□□ 1.43
TNFRSF10B-202ENST00000347739 SEPT4O43236 478 aa24■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CEP104O60308 925 aa24■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CD58P19256 250 aa24■■□□□ 1.43
TNFRSF10B-202ENST00000347739 ZNF200P98182 395 aaPredicted RBP24■■□□□ 1.43
TNFRSF10B-202ENST00000347739 TAF2Q6P1X5 1199 aa24■■□□□ 1.43
TNFRSF10B-202ENST00000347739 FAM124BQ9H5Z6 455 aaPredicted RBP24■■□□□ 1.43
TNFRSF10B-202ENST00000347739 LSM8O95777 96 aaKnown RBP23.99■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CRYBB1P53674 252 aaPredicted RBP23.99■■□□□ 1.43
TNFRSF10B-202ENST00000347739 PRKCZQ05513 592 aa23.99■■□□□ 1.43
TNFRSF10B-202ENST00000347739 GNASQ5JWF2 1037 aa23.99■■□□□ 1.43
TNFRSF10B-202ENST00000347739 RNF216Q9NWF9 866 aaPredicted RBP23.99■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CFHP08603 1231 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 WEE2P0C1S8 567 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 C1QBPQ07021 282 aaKnown RBP23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 WDR72Q3MJ13 1102 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 SCARA5Q6ZMJ2 495 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 SNX27Q96L92 541 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 LRRC1Q9BTT6 524 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CYP3A43Q9HB55 503 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 SPC25Q9HBM1 224 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 NXF1Q9UBU9 619 aaKnown RBP23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 PCDHGC3Q9UN70 934 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 POLIQ9UNA4 740 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 P4HA1P13674 534 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 COMTP21964 271 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 RBP5P82980 135 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 MESDQ14696 234 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CLUL1Q15846 466 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 UBL4BQ8N7F7 174 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 TMEM40Q8WWA1 233 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CD101Q93033 1021 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 EIF2AQ9BY44 585 aaKnown RBP23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 ZNF518BQ9C0D4 1074 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 WNT8AQ9H1J5 351 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 DPP3Q9NY33 737 aa23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CHORDC1Q9UHD1 332 aaPredicted RBP23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 NOC2LQ9Y3T9 749 aaKnown RBP23.98■■□□□ 1.43
TNFRSF10B-202ENST00000347739 SEC31AO94979 1220 aaKnown RBP23.97■■□□□ 1.43
TNFRSF10B-202ENST00000347739 POLR2BP30876 1174 aaKnown RBP23.97■■□□□ 1.43
TNFRSF10B-202ENST00000347739 LONRF2Q1L5Z9 754 aa23.97■■□□□ 1.43
TNFRSF10B-202ENST00000347739 BEND6Q5SZJ8 279 aaPredicted RBP23.97■■□□□ 1.43
TNFRSF10B-202ENST00000347739 LIN9Q5TKA1 542 aa23.97■■□□□ 1.43
TNFRSF10B-202ENST00000347739 DCAF12L1Q5VU92 463 aa23.97■■□□□ 1.43
TNFRSF10B-202ENST00000347739 C8orf74Q6P047 294 aa23.97■■□□□ 1.43
TNFRSF10B-202ENST00000347739 KIF12Q96FN5 646 aa23.97■■□□□ 1.43
TNFRSF10B-202ENST00000347739 ZSWIM1Q9BR11 485 aa23.97■■□□□ 1.43
TNFRSF10B-202ENST00000347739 SNTG2Q9NY99 539 aa23.97■■□□□ 1.43
TNFRSF10B-202ENST00000347739 TOMM70O94826 608 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 PAEPP09466 180 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 RARBP10826 455 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 RRM1P23921 792 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CDH5P33151 784 aaPredicted RBP23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 YARSP54577 528 aaKnown RBP23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 TNNC1P63316 161 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 PTP4A2Q12974 167 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 PASD1Q8IV76 773 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 HPDLQ96IR7 371 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 ADAM22Q9P0K1 906 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 GTF2IRD1Q9UHL9 959 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 AGAP1Q9UPQ3 857 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 PDCD11Q14690 1871 aaKnown RBP23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CCDC188H7C350 402 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CTNNA2P26232 953 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 SP3Q02447 781 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CACNB2Q08289 660 aaPredicted RBP23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 ALKAL1Q6UXT8 129 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CFHR5Q9BXR6 569 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 FAM53CQ9NYF3 392 aa23.96■■□□□ 1.43
TNFRSF10B-202ENST00000347739 CCDC66A2RUB6 948 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms