RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ADKP55263 362 aaKnown RBP20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 LILRA4P59901 499 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 ARHGAP44Q17R89 818 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 WDR72Q3MJ13 1102 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 ZNF667Q5HYK9 610 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 HERC6Q8IVU3 1022 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 LRRC43Q8N309 656 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 HASPINQ8TF76 798 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 TAF4BQ92750 862 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 FAM193BQ96PV7 902 aaPredicted RBP20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 PPP1R9BQ96SB3 815 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 MRPL9Q9BYD2 267 aaKnown RBP20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 NIF3L1Q9GZT8 377 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 SMYD3Q9H7B4 428 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 GBF1Q92538 1859 aa20.4■□□□□ 0.86
CHMP4A-201ENST00000347519 A0A1W2PQJ5 194 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 KIF4AO95239 1232 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 OR1G1P47890 313 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 TAF6P49848 677 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 CDH8P55286 799 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 JAM2P57087 298 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 HTRA4P83105 476 aaPredicted RBP20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 CUL2Q13617 745 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 E4F1Q66K89 784 aaPredicted RBP20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 PPFIBP1Q86W92 1011 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 DDX27Q96GQ7 796 aaKnown RBP20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 ZNF560Q96MR9 790 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 UROC1Q96N76 676 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 GDF15Q99988 308 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 IMPG2Q9BZV3 1241 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 FBXL5Q9UKA1 691 aa20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 PRG3Q9Y2Y8 225 aaPredicted RBP20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 R3HCC1Q9Y3T6 440 aaKnown RBP20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 MRPL42Q9Y6G3 142 aaKnown RBP20.39■□□□□ 0.85
CHMP4A-201ENST00000347519 I3L4J1 428 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 NRP1O14786 923 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 GALTP07902 379 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 ATP2A2P16615 1042 aaKnown RBP20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 BRCC3P46736 316 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 GCNT1Q02742 428 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 CCDC173Q0VFZ6 552 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 MYO1EQ12965 1108 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 RAPGEF1Q13905 1077 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 TRIM14Q14142 442 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 DRAP1Q14919 205 aaPredicted RBP20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 FAM109BQ6ICB4 259 aaPredicted RBP20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 PDXDC1Q6P996 788 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 DCLRE1AQ6PJP8 1040 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 CCDC186Q7Z3E2 898 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 CMTR2Q8IYT2 770 aaKnown RBP20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 UBR7Q8N806 425 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 TC2NQ8N9U0 490 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 CCDC150Q8NCX0 1101 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 SLC9A7Q96T83 725 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 YME1L1Q96TA2 773 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 STK33Q9BYT3 514 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 EDEM3Q9BZQ6 932 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 MARCH5Q9NX47 278 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 IMPACTQ9P2X3 320 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 SNX9Q9Y5X1 595 aa20.38■□□□□ 0.85
CHMP4A-201ENST00000347519 TSC2P49815 1807 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 GRXCR1A8MXD5 290 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 KPNA7A9QM74 516 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 NT5C1B-RDH14C9J2C7 533 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 FOXN3O00409 490 aaPredicted RBP20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 MFAP3LO75121 409 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 B3GAT3O94766 335 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 WEE2P0C1S8 567 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 ACO1P21399 889 aaKnown RBP20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 KRT9P35527 623 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 PNPLA4P41247 253 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 AARSP49588 968 aaKnown RBP eCLIP20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 BCAR1P56945 870 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 BTG3Q14201 252 aaPredicted RBP20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 SV2CQ496J9 727 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 TIGD5Q53EQ6 642 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 CACNA2D4Q7Z3S7 1137 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 TMEM173Q86WV6 379 aaPredicted RBP20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 PHOSPHO2Q8TCD6 241 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 BCL7CQ8WUZ0 217 aaPredicted RBP20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 BCO2Q9BYV7 579 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 GDAP2Q9NXN4 497 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 NME7Q9Y5B8 376 aa20.37■□□□□ 0.85
CHMP4A-201ENST00000347519 LCHNA4D1U4 455 aa20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 LRRC53A6NM62 1247 aa20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 AKR1B15C9JRZ8 316 aaPredicted RBP20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 RABGGTBP53611 331 aa20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 MFAP3P55082 362 aa20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 ZBED6P86452 979 aa20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 LIMS2Q7Z4I7 341 aa20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 RSPH1Q8WYR4 309 aa20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 SHC3Q92529 594 aa20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 RNPC3Q96LT9 517 aaKnown RBP20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 TMEM175Q9BSA9 504 aa20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 ZBED2Q9BTP6 218 aa20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 LUC7L2Q9Y383 392 aaKnown RBP20.36■□□□□ 0.85
CHMP4A-201ENST00000347519 F8VZ95 297 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 TMEM189-UBE2V1I3L0A0 370 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 CALCAP01258 141 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms