RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 ELSPBP1Q96BH3 223 aa11.93□□□□□ -0.5
UBE2A-201ENST00000346330 SHDQ96IW2 340 aa11.93□□□□□ -0.5
UBE2A-201ENST00000346330 TIPINQ9BVW5 301 aa11.93□□□□□ -0.5
UBE2A-201ENST00000346330 LRRC3Q9BY71 257 aa11.93□□□□□ -0.5
UBE2A-201ENST00000346330 AFF4Q9UHB7 1163 aaKnown RBP11.93□□□□□ -0.5
UBE2A-201ENST00000346330 YIPF1Q9Y548 306 aa11.93□□□□□ -0.5
UBE2A-201ENST00000346330 CACNA1IQ9P0X4 2223 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 A0A0B4J269 797 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 ANKRD63C9JTQ0 380 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 H7C4K7 107 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 OAZ2O95190 189 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 NFICP08651 508 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 CLTAP09496 248 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 MYL4P12829 197 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 NMT1P30419 496 aaKnown RBP11.92□□□□□ -0.5
UBE2A-201ENST00000346330 LRPAP1P30533 357 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 MATR3P43243 847 aaKnown RBP eCLIP11.92□□□□□ -0.5
UBE2A-201ENST00000346330 ID4P47928 161 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 ZNF131P52739 623 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 CSTF1Q05048 431 aaKnown RBP11.92□□□□□ -0.5
UBE2A-201ENST00000346330 DUSP4Q13115 394 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 ZC2HC1CQ53FD0 456 aaPredicted RBP11.92□□□□□ -0.5
UBE2A-201ENST00000346330 WDR44Q5JSH3 913 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 TPGS2Q68CL5 300 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 PDZD4Q76G19 769 aaPredicted RBP11.92□□□□□ -0.5
UBE2A-201ENST00000346330 MAP4K3Q8IVH8 894 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 ATAD1Q8NBU5 361 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 BICD1Q96G01 975 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 FAM84AQ96KN4 292 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 LRRC3BQ96PB8 259 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 BCO2Q9BYV7 579 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 ZNF334Q9HCZ1 680 aaPredicted RBP11.92□□□□□ -0.5
UBE2A-201ENST00000346330 TBX20Q9UMR3 447 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 NDRG2Q9UN36 371 aaKnown RBP11.92□□□□□ -0.5
UBE2A-201ENST00000346330 SLC27A5Q9Y2P5 690 aa11.92□□□□□ -0.5
UBE2A-201ENST00000346330 A0A1W2PRU2 124 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 MED19A0JLT2 244 aaPredicted RBP11.91□□□□□ -0.5
UBE2A-201ENST00000346330 H3BQV1 296 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 K7ENM7 598 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 ARNTLO00327 626 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 HNRNPDLO14979 420 aaKnown RBP11.91□□□□□ -0.5
UBE2A-201ENST00000346330 LAMTOR5O43504 91 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 PIGRP01833 764 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 GDI1P31150 447 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 LIG4P49917 911 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 SMTNP53814 917 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 EPHA5P54756 1037 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 WNT7BP56706 349 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 PFKPQ01813 784 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 YWHAHQ04917 246 aaPredicted RBP11.91□□□□□ -0.5
UBE2A-201ENST00000346330 MTAPQ13126 283 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 ARL6IP4Q66PJ3 421 aaKnown RBP11.91□□□□□ -0.5
UBE2A-201ENST00000346330 JADE1Q6IE81 842 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 MYCT1Q8N699 235 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 APPL2Q8NEU8 664 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 OR10T2Q8NGX3 314 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 ZSCAN18Q8TBC5 510 aaPredicted RBP11.91□□□□□ -0.5
UBE2A-201ENST00000346330 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 CDK5RAP3Q96JB5 506 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 MKNK1Q9BUB5 465 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 OSBPL6Q9BZF3 934 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 PLEKHA5Q9HAU0 1116 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 ZFP14Q9HCL3 533 aa11.91□□□□□ -0.5
UBE2A-201ENST00000346330 LARSQ9P2J5 1176 aaKnown RBP11.91□□□□□ -0.5
UBE2A-201ENST00000346330 CPSF3Q9UKF6 684 aaKnown RBP11.91□□□□□ -0.5
UBE2A-201ENST00000346330 MTMR11A4FU01 709 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 OGTO15294 1046 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 ADRB2P07550 413 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 TDGF1P13385 188 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 SOX9P48436 509 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 ACOT2P49753 483 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 PPP2R3AQ06190 1150 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 GAS6Q14393 721 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 CYP4A22Q5TCH4 519 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 SPATA1Q5VX52 437 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 ZNF852Q6ZMS4 543 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 GAREM2Q75VX8 874 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 ZSWIM2Q8NEG5 633 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 NELL1Q92832 810 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 SMARCD2Q92925 531 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 KCNN1Q92952 543 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 ZNF512Q96ME7 567 aaPredicted RBP11.9□□□□□ -0.5
UBE2A-201ENST00000346330 TRMT61BQ9BVS5 477 aaKnown RBP11.9□□□□□ -0.5
UBE2A-201ENST00000346330 SEMA4AQ9H3S1 761 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 ZHX3Q9H4I2 956 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 BRD9Q9H8M2 597 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 PRMT8Q9NR22 394 aaPredicted RBP11.9□□□□□ -0.5
UBE2A-201ENST00000346330 C2orf42Q9NWW7 574 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 KCND2Q9NZV8 630 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 ODF2LQ9ULJ1 636 aa11.9□□□□□ -0.5
UBE2A-201ENST00000346330 UBQLN1Q9UMX0 589 aaKnown RBP11.9□□□□□ -0.5
UBE2A-201ENST00000346330 HEPACAM2A8MVW5 462 aa11.89□□□□□ -0.51
UBE2A-201ENST00000346330 ZNF197O14709 1029 aa11.89□□□□□ -0.51
UBE2A-201ENST00000346330 TRAK2O60296 914 aa11.89□□□□□ -0.51
UBE2A-201ENST00000346330 MICAL2O94851 1124 aa11.89□□□□□ -0.51
UBE2A-201ENST00000346330 FAM13AO94988 1023 aa11.89□□□□□ -0.51
UBE2A-201ENST00000346330 CYP3A5P20815 502 aa11.89□□□□□ -0.51
UBE2A-201ENST00000346330 KCNA4P22459 653 aa11.89□□□□□ -0.51
UBE2A-201ENST00000346330 MARCKSP29966 332 aaPredicted RBP11.89□□□□□ -0.51
UBE2A-201ENST00000346330 LILRA4P59901 499 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms