RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 FAM153BP0C7A2 387 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 TOB1P50616 345 aaPredicted RBP18.31■□□□□ 0.52
SPAST-202ENST00000345662 PLOD1Q02809 727 aaPredicted RBP18.31■□□□□ 0.52
SPAST-202ENST00000345662 IMPG1Q17R60 797 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 FAM153CQ494X1 144 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 PGBD4Q96DM1 585 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 PAK5Q9P286 719 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 FAM153AQ9UHL3 310 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 UBAP1LF5GYI3 381 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 TRMT5Q32P41 509 aaKnown RBP18.3■□□□□ 0.52
SPAST-202ENST00000345662 ZSCAN5CA6NGD5 496 aaPredicted RBP18.3■□□□□ 0.52
SPAST-202ENST00000345662 TRIM49D1C9J1S8 452 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 MYL2P10916 166 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 MIGA2Q7L4E1 593 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 HERC5Q9UII4 1024 aaKnown RBP18.3■□□□□ 0.52
SPAST-202ENST00000345662 OVOS2A0A0G2JMS6 1433 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 P4HA2O15460 535 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 ATP9BO43861 1147 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 SLC34A1Q06495 639 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 CCDC15Q0P6D6 951 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 ZNF568Q3ZCX4 644 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 IRGCQ6NXR0 463 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 GJB7Q6PEY0 223 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 CLEC4GQ6UXB4 293 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 TTC39CQ8N584 583 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 COG4Q9H9E3 785 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 GDF3Q9NR23 364 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 WDR35Q9P2L0 1181 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 TEKT2Q9UIF3 430 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 GGA2Q9UJY4 613 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 PSMC3P17980 439 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 TMC3Q7Z5M5 1100 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 RMDN3Q96TC7 470 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 SIKE1Q9BRV8 207 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 PCDHB2Q9Y5E7 798 aa18.3■□□□□ 0.52
SPAST-202ENST00000345662 SALL3Q9BXA9 1300 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 TBX3O15119 743 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 EIF3DO15371 548 aaKnown RBP eCLIP18.29■□□□□ 0.52
SPAST-202ENST00000345662 CATSPER2Q96P56 530 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 MCEEQ96PE7 176 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 DBNDD1Q9H9R9 158 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 A0A0A6YYK5 440 aaPredicted RBP18.29■□□□□ 0.52
SPAST-202ENST00000345662 ALDH5A1P51649 535 aaPredicted RBP18.29■□□□□ 0.52
SPAST-202ENST00000345662 TNFAIP2Q03169 654 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 ATP8B3O60423 1300 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 SRRM3A6NNA2 597 aaPredicted RBP18.29■□□□□ 0.52
SPAST-202ENST00000345662 EFHC2Q5JST6 749 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 TSEN2Q8NCE0 465 aaKnown RBP18.29■□□□□ 0.52
SPAST-202ENST00000345662 STK32AQ8WU08 396 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 MTMR8Q96EF0 704 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 SLC5A4Q9NY91 659 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 PJA2O43164 708 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 TFRCP02786 760 aaKnown RBP18.29■□□□□ 0.52
SPAST-202ENST00000345662 NUDT2P50583 147 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 NUP107P57740 925 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 PPP2R3CQ969Q6 453 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 COA1Q9GZY4 146 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 SEMA4AQ9H3S1 761 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 KCND2Q9NZV8 630 aa18.29■□□□□ 0.52
SPAST-202ENST00000345662 TTMPQ5BVD1 217 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 LMBRD2Q68DH5 695 aaPredicted RBP18.28■□□□□ 0.52
SPAST-202ENST00000345662 NUP93Q8N1F7 819 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 JADE3Q92613 823 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 ULK4Q96C45 1275 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 PLA2G12BQ9BX93 195 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 TAGLN3Q9UI15 199 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 DGKIO75912 1065 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 FAM200BP0CF97 657 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 CDH2P19022 906 aaPredicted RBP18.28■□□□□ 0.52
SPAST-202ENST00000345662 PON1P27169 355 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 SPRP35270 261 aaPredicted RBP18.28■□□□□ 0.52
SPAST-202ENST00000345662 KCNQ4P56696 695 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 PTENP60484 403 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 CRELD2Q6UXH1 353 aaPredicted RBP18.28■□□□□ 0.52
SPAST-202ENST00000345662 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 ZNF786Q8N393 782 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 TIPINQ9BVW5 301 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 FRMD8Q9BZ67 464 aaPredicted RBP18.28■□□□□ 0.52
SPAST-202ENST00000345662 SHCBP1LQ9BZQ2 653 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 TYW5A2RUC4 315 aaKnown RBP18.28■□□□□ 0.52
SPAST-202ENST00000345662 HADHAP40939 763 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 DUOXA2Q1HG44 320 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 SBK1Q52WX2 424 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 NT5DC1Q5TFE4 455 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 FAM193BQ96PV7 902 aaPredicted RBP18.28■□□□□ 0.52
SPAST-202ENST00000345662 POLR3FQ9H1D9 316 aaPredicted RBP18.28■□□□□ 0.52
SPAST-202ENST00000345662 TASP1Q9H6P5 420 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 UNC13BO14795 1591 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 ERVK-9P63128 1117 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 SNRNP35Q16560 246 aaKnown RBP18.28■□□□□ 0.52
SPAST-202ENST00000345662 KBTBD4Q9NVX7 518 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 SLC13A4Q9UKG4 626 aa18.28■□□□□ 0.52
SPAST-202ENST00000345662 KIAA0391O15091 583 aaKnown RBP18.27■□□□□ 0.52
SPAST-202ENST00000345662 KCNA1Q09470 495 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 MTM1Q13496 603 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 RASA2Q15283 850 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 UGP2Q16851 508 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 IFNEQ86WN2 208 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 CREG2Q8IUH2 290 aa18.27■□□□□ 0.52
SPAST-202ENST00000345662 GPR101Q96P66 508 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms