RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PRKAB1Q9Y478 270 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 TRIM13O60858 407 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PLCG2P16885 1265 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CMA1P23946 247 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MARSP56192 900 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 GFPT1Q06210 699 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 GIT2Q14161 759 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 KARSQ15046 597 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 TTMPQ5BVD1 217 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 LNX2Q8N448 690 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PIGKQ92643 395 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 RRP7BPQ9NSQ0 103 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 POLR3EQ9NVU0 708 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 GPC4O75487 556 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 TFRCP02786 760 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 FOSL2P15408 326 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 GP5P40197 560 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 NSFP46459 744 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 TRAF2Q12933 501 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 NR1D2Q14995 579 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 BARGINQ6ZT62 677 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 NEK9Q8TD19 979 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF473Q8WTR7 871 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PGAP2Q9UHJ9 254 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ADAMTS8Q9UP79 889 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MTO1Q9Y2Z2 717 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MYO7AQ13402 2215 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 IL18RAPO95256 599 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 NPR3P17342 541 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PTDSS1P48651 473 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MAPK11Q15759 364 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CCDC81Q6ZN84 652 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF677Q86XU0 584 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ACAT2Q9BWD1 397 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 OR2B2Q9GZK3 357 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 DDX43Q9NXZ2 648 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MAT2BQ9NZL9 334 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 NFKBIL1Q9UBC1 381 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 DNM3Q9UQ16 869 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SLITRK3O94933 977 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CD81P60033 236 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SLC34A1Q06495 639 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 FBXO43Q4G163 708 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 FNIP1Q8TF40 1166 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 TWNKQ96RR1 684 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 NPAP1Q9NZP6 1156 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CTTNBP2Q8WZ74 1663 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 TNFRSF10AO00220 468 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 OSBPP22059 807 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 UGP2Q16851 508 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ERMARDQ5T6L9 678 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 KRT40Q6A162 431 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 LEMD2Q8NC56 503 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 IFNA7P01567 189 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 STAT6P42226 847 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MFAP3P55082 362 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 EIF5AP63241 154 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 THEMIS2Q5TEJ8 643 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MZT2BQ6NZ67 158 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PALB2Q86YC2 1186 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 AHI1Q8N157 1196 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 NOTOA8MTQ0 251 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 AP1G1O43747 822 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ADD2P35612 726 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 COASYQ13057 564 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PET117Q6UWS5 81 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CEP72Q9P209 647 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CFAP99D6REC4 459 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 H7C1D1 291 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MTSS1O43312 755 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MSLNQ13421 630 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ANKDD1AQ495B1 522 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SPATS1Q496A3 300 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TNNI3KQ59H18 835 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ARMC4Q5T2S8 1044 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 KCNV1Q6PIU1 500 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 BEND4Q6ZU67 534 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TEKT5Q96M29 485 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NUDT16L1Q9BRJ7 211 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 HESX1Q9UBX0 185 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 AGAP1Q9UPQ3 857 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CD4P01730 458 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TRAPPC2P0DI81 140 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TRAPPC2BP0DI82 140 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 VAMP1P23763 118 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MAGEA10P43363 369 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 EZH2Q15910 746 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PSD2Q9BQI7 771 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NYAP2Q9P242 653 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 BTBD3Q9Y2F9 522 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PNPLA7Q6ZV29 1317 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RNF103-CHMP3A0A140T963 221 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 GSAPA4D1B5 854 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 VARSP26640 1264 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 AKAP14Q86UN6 197 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SLC35B4Q969S0 331 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 VPS39Q96JC1 886 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 FMO2Q99518 471 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ETNK1Q9HBU6 452 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ZDHHC7Q9NXF8 308 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms