RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 TCHPQ9BT92 498 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 AZI2Q9H6S1 392 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 GJB1P08034 283 aa21.39■■□□□ 1.01
SPG7-202ENST00000341316 TBXAS1P24557 533 aaPredicted RBP21.39■■□□□ 1.01
SPG7-202ENST00000341316 NF2P35240 595 aa21.39■■□□□ 1.01
SPG7-202ENST00000341316 ZNF132P52740 706 aa21.39■■□□□ 1.01
SPG7-202ENST00000341316 SWT1Q5T5J6 900 aaKnown RBP21.39■■□□□ 1.01
SPG7-202ENST00000341316 CDCA2Q69YH5 1023 aaPredicted RBP21.39■■□□□ 1.01
SPG7-202ENST00000341316 PHF13Q86YI8 300 aaPredicted RBP21.39■■□□□ 1.01
SPG7-202ENST00000341316 RNF149Q8NC42 400 aa21.39■■□□□ 1.01
SPG7-202ENST00000341316 TRAPPC12Q8WVT3 735 aa21.39■■□□□ 1.01
SPG7-202ENST00000341316 FAM212AQ96EL1 285 aa21.39■■□□□ 1.01
SPG7-202ENST00000341316 MRPL4Q9BYD3 311 aaKnown RBP21.39■■□□□ 1.01
SPG7-202ENST00000341316 ADARB2Q9NS39 739 aaKnown RBP21.39■■□□□ 1.01
SPG7-202ENST00000341316 R3HDM2Q9Y2K5 976 aaKnown RBP21.39■■□□□ 1.01
SPG7-202ENST00000341316 PASKQ96RG2 1323 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 ECEL1O95672 775 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 ASS1P00966 412 aaKnown RBP21.38■■□□□ 1.01
SPG7-202ENST00000341316 MYL6P60660 151 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 IER5Q5VY09 327 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 TRIM72Q6ZMU5 477 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 ANKS1BQ7Z6G8 1248 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 CCDC13Q8IYE1 715 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 C3orf20Q8ND61 904 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 RBPJLQ9UBG7 517 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 PAEPP09466 180 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 FGFR4P22455 802 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 EFNA5P52803 228 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 EIF3BP55884 814 aaKnown RBP21.38■■□□□ 1.01
SPG7-202ENST00000341316 CELF3Q5SZQ8 465 aaKnown RBP21.38■■□□□ 1.01
SPG7-202ENST00000341316 PLEKHA7Q6IQ23 1121 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 CCDC121Q6ZUS5 278 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 CCDC125Q86Z20 511 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 WDR49Q8IV35 697 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 ZNF606Q8WXB4 792 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 COPS5Q92905 334 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 SLCO2A1Q92959 643 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 TLCD1Q96CP7 247 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 RUNDC3BQ96NL0 473 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 PLVAPQ9BX97 442 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 HEMGNQ9BXL5 484 aa21.38■■□□□ 1.01
SPG7-202ENST00000341316 IGKV6-21A0A0C4DH24 114 aa21.37■■□□□ 1.01
SPG7-202ENST00000341316 KRT17Q04695 432 aa21.37■■□□□ 1.01
SPG7-202ENST00000341316 PPP1R7Q15435 360 aa21.37■■□□□ 1.01
SPG7-202ENST00000341316 LIN9Q5TKA1 542 aa21.37■■□□□ 1.01
SPG7-202ENST00000341316 DENND2CQ68D51 928 aa21.37■■□□□ 1.01
SPG7-202ENST00000341316 FBXO16Q8IX29 292 aaPredicted RBP21.37■■□□□ 1.01
SPG7-202ENST00000341316 UHMK1Q8TAS1 419 aaKnown RBP21.37■■□□□ 1.01
SPG7-202ENST00000341316 PARP2Q9UGN5 583 aa21.37■■□□□ 1.01
SPG7-202ENST00000341316 LGR5O75473 907 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 PRKCBP05771 671 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 GBP1P32455 592 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 PLCB4Q15147 1175 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 FAM167AQ96KS9 214 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 MTRF1LQ9UGC7 380 aaKnown RBP21.36■■□□□ 1.01
SPG7-202ENST00000341316 DICER1Q9UPY3 1922 aaKnown RBP21.36■■□□□ 1.01
SPG7-202ENST00000341316 RALAP11233 206 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 CD58P19256 250 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 IREB2P48200 963 aaKnown RBP21.36■■□□□ 1.01
SPG7-202ENST00000341316 CDR2LQ86X02 465 aaPredicted RBP21.36■■□□□ 1.01
SPG7-202ENST00000341316 SEC16BQ96JE7 1060 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 VCPIP1Q96JH7 1222 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 FAM118BQ9BPY3 351 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 DCLK3Q9C098 648 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 CPSF3Q9UKF6 684 aaKnown RBP21.36■■□□□ 1.01
SPG7-202ENST00000341316 USTQ9Y2C2 406 aa21.36■■□□□ 1.01
SPG7-202ENST00000341316 C5orf60A6NFR6 353 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 NOP56O00567 594 aaKnown RBP21.35■■□□□ 1.01
SPG7-202ENST00000341316 OGTO15294 1046 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 TLR3O15455 904 aaKnown RBP21.35■■□□□ 1.01
SPG7-202ENST00000341316 RPL7AP62424 266 aaKnown RBP21.35■■□□□ 1.01
SPG7-202ENST00000341316 C1QBPQ07021 282 aaKnown RBP21.35■■□□□ 1.01
SPG7-202ENST00000341316 MCL1Q07820 350 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 KLF1Q13351 362 aaPredicted RBP21.35■■□□□ 1.01
SPG7-202ENST00000341316 MOGSQ13724 837 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 BYSLQ13895 437 aaKnown RBP21.35■■□□□ 1.01
SPG7-202ENST00000341316 ZNF394Q53GI3 561 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 ERO1BQ86YB8 467 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 RHPN2Q8IUC4 686 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 AAASQ9NRG9 546 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.35■■□□□ 1.01
SPG7-202ENST00000341316 DNAJC25-GNG10A0A024R161 153 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 B4GALT5O43286 388 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 TCF4P15884 667 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 IVDP26440 423 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 TRIP13Q15645 432 aaPredicted RBP21.35■■□□□ 1.01
SPG7-202ENST00000341316 MAPK6Q16659 721 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 SPRED3Q2MJR0 410 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 MDM1Q8TC05 714 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 OSBPL7Q9BZF2 842 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 IMPG2Q9BZV3 1241 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 AGTPBP1Q9UPW5 1226 aa21.35■■□□□ 1.01
SPG7-202ENST00000341316 SMIM23A6NLE4 172 aa21.34■■□□□ 1.01
SPG7-202ENST00000341316 RIPK2O43353 540 aa21.34■■□□□ 1.01
SPG7-202ENST00000341316 MMP8P22894 467 aa21.34■■□□□ 1.01
SPG7-202ENST00000341316 BRD2P25440 801 aaKnown RBP21.34■■□□□ 1.01
SPG7-202ENST00000341316 GJC1P36383 396 aa21.34■■□□□ 1.01
SPG7-202ENST00000341316 GRM1Q13255 1194 aa21.34■■□□□ 1.01
SPG7-202ENST00000341316 MXD4Q14582 209 aaPredicted RBP21.34■■□□□ 1.01
SPG7-202ENST00000341316 CCDC50Q8IVM0 306 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms