RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 BCAR1P56945 870 aa12.5□□□□□ -0.41
C2orf88-201ENST00000340623 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.5□□□□□ -0.41
C2orf88-201ENST00000340623 TNIP3Q96KP6 325 aa12.5□□□□□ -0.41
C2orf88-201ENST00000340623 EIF3CQ99613 913 aaKnown RBP12.5□□□□□ -0.41
C2orf88-201ENST00000340623 NT5C1AQ9BXI3 368 aa12.5□□□□□ -0.41
C2orf88-201ENST00000340623 CHORDC1Q9UHD1 332 aaPredicted RBP12.5□□□□□ -0.41
C2orf88-201ENST00000340623 HYOU1Q9Y4L1 999 aa12.5□□□□□ -0.41
C2orf88-201ENST00000340623 GTPBP10A4D1E9 387 aaKnown RBP12.49□□□□□ -0.41
C2orf88-201ENST00000340623 TRAPPC3O43617 180 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 ADSSP30520 456 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 ACTN2P35609 894 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 SLC7A5Q01650 507 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 IFFO1Q0D2I5 559 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 MYO9BQ13459 2157 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 CDO1Q16878 200 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 GSTA5Q7RTV2 222 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 EIF2AQ9BY44 585 aaKnown RBP12.49□□□□□ -0.41
C2orf88-201ENST00000340623 ANAPC7Q9UJX3 599 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 GNEQ9Y223 722 aaKnown RBP12.49□□□□□ -0.41
C2orf88-201ENST00000340623 SCN4AP35499 1836 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 IGKV6D-21A0A0A0MT36 114 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 DAPK3O43293 454 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 SGPL1O95470 568 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 SLC18A3Q16572 532 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 SND1Q7KZF4 910 aaKnown RBP eCLIP12.49□□□□□ -0.41
C2orf88-201ENST00000340623 DNAAF5Q86Y56 855 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 GPATCH11Q8N954 259 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 MRPL47Q9HD33 250 aaKnown RBP12.49□□□□□ -0.41
C2orf88-201ENST00000340623 MTUS1Q9ULD2 1270 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 POLIQ9UNA4 740 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 A0A087X0T9 212 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 TLDC2A0PJX2 215 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 F8VZ95 297 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 FAM228BP0C875 321 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 ELF1P32519 619 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 CTCFP49711 727 aaPredicted RBP12.49□□□□□ -0.41
C2orf88-201ENST00000340623 KCNMA1Q12791 1236 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 C10orf76Q5T2E6 689 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 CNPY4Q8N129 248 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 TTC39CQ8N584 583 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 GPR161Q8N6U8 529 aaKnown RBP12.49□□□□□ -0.41
C2orf88-201ENST00000340623 MORC4Q8TE76 937 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 PDZD7Q9H5P4 517 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 NGRNQ9NPE2 291 aaKnown RBP12.49□□□□□ -0.41
C2orf88-201ENST00000340623 CISHQ9NSE2 258 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 FAM105AQ9NUU6 356 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 SIK3Q9Y2K2 1263 aa12.49□□□□□ -0.41
C2orf88-201ENST00000340623 SSU72P8A0A1W2PR75 194 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 RAB27AP51159 221 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 PSMC1P62191 440 aaKnown RBP12.48□□□□□ -0.41
C2orf88-201ENST00000340623 GPC5P78333 572 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 C2CD6Q53TS8 623 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 FIGNQ5HY92 759 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 FBXO47Q5MNV8 452 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 TSHZ1Q6ZSZ6 1077 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 ACOT1Q86TX2 421 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 PXYLP1Q8TE99 480 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 CCDC114Q96M63 670 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 MTIF3Q9H2K0 278 aaKnown RBP12.48□□□□□ -0.41
C2orf88-201ENST00000340623 C2CD2LO14523 706 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 GNL1P36915 607 aaPredicted RBP12.48□□□□□ -0.41
C2orf88-201ENST00000340623 TDRD10Q5VZ19 366 aaKnown RBP12.48□□□□□ -0.41
C2orf88-201ENST00000340623 NECAB2Q7Z6G3 386 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 C12orf56Q8IXR9 622 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 UBA3Q8TBC4 463 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 EMID1Q96A84 441 aaPredicted RBP12.48□□□□□ -0.41
C2orf88-201ENST00000340623 ZFP42Q96MM3 310 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 HSD3B7Q9H2F3 369 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 FZD8Q9H461 694 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 TBKBP1A7MCY6 615 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 CYB561D2O14569 222 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 HOXD13P35453 343 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 GTF2A1P52655 376 aaPredicted RBP12.48□□□□□ -0.41
C2orf88-201ENST00000340623 C1QTNF8P60827 252 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 TLE2Q04725 743 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 C8orf74Q6P047 294 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 HDXQ7Z353 690 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 ACP6Q9NPH0 428 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 KAT6AQ92794 2004 aa12.48□□□□□ -0.41
C2orf88-201ENST00000340623 RBM47A0AV96 593 aaKnown RBP12.47□□□□□ -0.41
C2orf88-201ENST00000340623 PNPLA4P41247 253 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 GALCP54803 685 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 HADHQ16836 314 aaKnown RBP12.47□□□□□ -0.41
C2orf88-201ENST00000340623 SLC47A2Q86VL8 602 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 GSPT2Q8IYD1 628 aaKnown RBP12.47□□□□□ -0.41
C2orf88-201ENST00000340623 SLC20A1Q8WUM9 679 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 CWC15Q9P013 229 aaKnown RBP12.47□□□□□ -0.41
C2orf88-201ENST00000340623 LCMT1Q9UIC8 334 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 IPPQ9Y573 584 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 CNTNAP2Q9UHC6 1331 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 ATMINO43313 823 aaPredicted RBP12.47□□□□□ -0.41
C2orf88-201ENST00000340623 CALCAP01258 141 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 ANXA13P27216 316 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 ALDH7A1P49419 539 aaKnown RBP12.47□□□□□ -0.41
C2orf88-201ENST00000340623 MCL1Q07820 350 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 C2orf54Q08AI8 447 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 IRF5Q13568 498 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 MMS22LQ6ZRQ5 1243 aa12.47□□□□□ -0.41
C2orf88-201ENST00000340623 SCLYQ96I15 445 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms