RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 TMEM161AQ9NX61 479 aa8.4□□□□□ -1.06
TMC1-202ENST00000340019 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.4□□□□□ -1.06
TMC1-202ENST00000340019 EPN1Q9Y6I3 576 aaPredicted RBP8.4□□□□□ -1.06
TMC1-202ENST00000340019 NDUFA10O95299 355 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 LCA5LO95447 670 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 CLCN1P35523 988 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 PTK2Q05397 1052 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 KLHL30Q0D2K2 578 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 WDR72Q3MJ13 1102 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 ZNF667Q5HYK9 610 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 CLLU1OSQ5K130 101 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 DEFB128Q7Z7B8 93 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 RNF169Q8NCN4 708 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 POLIQ9UNA4 740 aa8.4□□□□□ -1.07
TMC1-202ENST00000340019 EIF4A3P38919 411 aaKnown RBP8.39□□□□□ -1.07
TMC1-202ENST00000340019 ZNF132P52740 706 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 GRIK3Q13003 919 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 MFSD5Q6N075 450 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 CNKSR3Q6P9H4 555 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 ZNF571Q7Z3V5 609 aaPredicted RBP8.39□□□□□ -1.07
TMC1-202ENST00000340019 FNDC1Q4ZHG4 1894 aaPredicted RBP8.39□□□□□ -1.07
TMC1-202ENST00000340019 ESPNB1AK53 854 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 CYP26A1O43174 497 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 CCDC172P0C7W6 258 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 MYO1EQ12965 1108 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 SLC47A2Q86VL8 602 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 CCDC42Q96M95 316 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 SDCBP2Q9H190 292 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 FAM124BQ9H5Z6 455 aaPredicted RBP8.39□□□□□ -1.07
TMC1-202ENST00000340019 PRDM5Q9NQX1 630 aaPredicted RBP8.39□□□□□ -1.07
TMC1-202ENST00000340019 CISHQ9NSE2 258 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 NXF1Q9UBU9 619 aaKnown RBP8.39□□□□□ -1.07
TMC1-202ENST00000340019 REXO2Q9Y3B8 237 aaKnown RBP8.39□□□□□ -1.07
TMC1-202ENST00000340019 ADGRG1Q9Y653 693 aa8.39□□□□□ -1.07
TMC1-202ENST00000340019 EIF3CLB5ME19 914 aaKnown RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 ZNF263O14978 683 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 SPTLC1O15269 473 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 POMCP01189 267 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 WEE2P0C1S8 567 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 FGFR1P11362 822 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 RAG1P15918 1043 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 ANXA13P27216 316 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 PNPLA4P41247 253 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 KIF11P52732 1056 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 UPP1Q16831 310 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 TDRD12Q587J7 1177 aaKnown RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 GLB1LQ6UWU2 654 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 LIMS2Q7Z4I7 341 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 EPS8L1Q8TE68 723 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 EIF3CQ99613 913 aaKnown RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 DESI2Q9BSY9 194 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 CYP3A43Q9HB55 503 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 ACP6Q9NPH0 428 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 GDAP2Q9NXN4 497 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 NOCTQ9UK39 431 aaKnown RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 NENFQ9UMX5 172 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 R3HCC1Q9Y3T6 440 aaKnown RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 PCDHB7Q9Y5E2 793 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 P4HA1P13674 534 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 CSF2RAP15509 400 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 CYP11B1P15538 503 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 IGFBP6P24592 240 aaPredicted RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 RPL9P32969 192 aaKnown RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 CYLC1P35663 651 aaPredicted RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 CLCNKBP51801 687 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 LILRA4P59901 499 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 GFPT1Q06210 699 aaPredicted RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 C17orf53Q8N3J3 647 aaPredicted RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 SLC30A5Q8TAD4 765 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 DDX1Q92499 740 aaKnown RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 ZNF560Q96MR9 790 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 PAAF1Q9BRP4 392 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 SMYD3Q9H7B4 428 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 SPTLC3Q9NUV7 552 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 CACNG4Q9UBN1 327 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 PCDHB4Q9Y5E5 795 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 COL4A6Q14031 1691 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 A0A087X0T9 212 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 USP27XA6NNY8 438 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 KPNA7A9QM74 516 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 PFKMP08237 780 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 FAM228BP0C875 321 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 KRT5P13647 590 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 IBSPP21815 317 aaPredicted RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 MSNP26038 577 aaKnown RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 USP8P40818 1118 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 RAP1GAPP47736 663 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 TAF6P49848 677 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 CDH8P55286 799 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 DSC1Q08554 894 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 INCA1Q0VD86 236 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 TUSC3Q13454 348 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 IKBKEQ14164 716 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 SLC18A3Q16572 532 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 NOMO2Q5JPE7 1267 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 TMEM270Q6UE05 265 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 SCARA5Q6ZMJ2 495 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.38□□□□□ -1.07
TMC1-202ENST00000340019 NOP9Q86U38 636 aaKnown RBP8.38□□□□□ -1.07
TMC1-202ENST00000340019 CCAR2Q8N163 923 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms