RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 PABPC5Q96DU9 382 aaKnown RBP13.86□□□□□ -0.19
SRSF3-201ENST00000339436 BORCS6Q96GS4 357 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 DUSP9Q99956 384 aaKnown RBP13.86□□□□□ -0.19
SRSF3-201ENST00000339436 EMILIN2Q9BXX0 1053 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 RXFP1Q9HBX9 757 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.86□□□□□ -0.19
SRSF3-201ENST00000339436 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 TTC28Q96AY4 2481 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 PTPRDP23468 1912 aa13.86□□□□□ -0.19
SRSF3-201ENST00000339436 TEX28O15482 410 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 NCK2O43639 380 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 CLASP2O75122 1294 aaKnown RBP13.85□□□□□ -0.19
SRSF3-201ENST00000339436 GLP2RO95838 553 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 ADH1AP07327 375 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 KRT19P08727 400 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 KRT13P13646 458 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 PTMSP20962 102 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 VAMP7P51809 220 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 AP3M2P53677 418 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 STX17P56962 302 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 NLRP12P59046 1061 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 CTC1Q2NKJ3 1217 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 SV2CQ496J9 727 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 VARS2Q5ST30 1063 aaKnown RBP13.85□□□□□ -0.19
SRSF3-201ENST00000339436 C1orf220Q5T0J3 134 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 SCARA3Q6AZY7 606 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 PDXDC1Q6P996 788 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 TRAPPC11Q7Z392 1133 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 CSGALNACT2Q8N6G5 542 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 VN1R2Q8NFZ6 395 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 LNX1Q8TBB1 728 aaPredicted RBP13.85□□□□□ -0.19
SRSF3-201ENST00000339436 ZNF516Q92618 1163 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 CEP63Q96MT8 703 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 RWDD2AQ9UIY3 292 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 AGAP1Q9UPQ3 857 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 IKBKBO14920 756 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 TBX10O75333 385 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 TRIM49P0CI25 452 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 TRIM49CP0CI26 452 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 ODC1P11926 461 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 NDUFV1P49821 464 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 MCCD1P59942 119 aaPredicted RBP13.85□□□□□ -0.19
SRSF3-201ENST00000339436 RBP5P82980 135 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 KCNC3Q14003 757 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 KLHL40Q2TBA0 621 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 TDRD10Q5VZ19 366 aaKnown RBP13.85□□□□□ -0.19
SRSF3-201ENST00000339436 DSTYKQ6XUX3 929 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 ANKS3Q6ZW76 656 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 APPL2Q8NEU8 664 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 SENP8Q96LD8 212 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 KLHL5Q96PQ7 755 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 IGFLR1Q9H665 355 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 CLDND1Q9NY35 253 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 FNIP2Q9P278 1114 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 MTRRQ9UBK8 725 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 DACH1Q9UI36 760 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 HCFC2Q9Y5Z7 792 aa13.85□□□□□ -0.19
SRSF3-201ENST00000339436 DENND4AQ7Z401 1863 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 TCF20Q9UGU0 1960 aaKnown RBP13.84□□□□□ -0.19
SRSF3-201ENST00000339436 MUC3AQ02505 3323 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 ARHGEF37A1IGU5 675 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 KPNA7A9QM74 516 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 LINC01565O15544 149 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 RPL17P18621 184 aaKnown RBP13.84□□□□□ -0.19
SRSF3-201ENST00000339436 TYMPP19971 482 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 RBM10P98175 930 aaKnown RBP13.84□□□□□ -0.19
SRSF3-201ENST00000339436 BIRC3Q13489 604 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 ZACNQ401N2 412 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 CAVIN1Q6NZI2 390 aaKnown RBP13.84□□□□□ -0.19
SRSF3-201ENST00000339436 C15orf39Q6ZRI6 1047 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 PPFIBP1Q86W92 1011 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 SYAP1Q96A49 352 aaPredicted RBP13.84□□□□□ -0.19
SRSF3-201ENST00000339436 MED15Q96RN5 788 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 UBE2ZQ9H832 354 aaPredicted RBP13.84□□□□□ -0.19
SRSF3-201ENST00000339436 PRDM6Q9NQX0 595 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 R3HCC1Q9Y3T6 440 aaKnown RBP13.84□□□□□ -0.19
SRSF3-201ENST00000339436 BACE2Q9Y5Z0 518 aa13.84□□□□□ -0.19
SRSF3-201ENST00000339436 MYH10P35580 1976 aa13.83□□□□□ -0.19
SRSF3-201ENST00000339436 C4BPAP04003 597 aaKnown RBP13.83□□□□□ -0.2
SRSF3-201ENST00000339436 CYP11A1P05108 521 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 LTBRP36941 435 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 CLCN4P51793 760 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 YWHAHQ04917 246 aaPredicted RBP13.83□□□□□ -0.2
SRSF3-201ENST00000339436 PPP3CAQ08209 521 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 MYO1EQ12965 1108 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 ADAM15Q13444 863 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 MRPL58Q14197 206 aaKnown RBP13.83□□□□□ -0.2
SRSF3-201ENST00000339436 ZNF280DQ6N043 979 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 SV2AQ7L0J3 742 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 SLC22A17Q8WUG5 538 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 HLA-CQ95604 372 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 HPDLQ96IR7 371 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 CLSTN3Q9BQT9 956 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 GDAP2Q9NXN4 497 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 THEGQ9P2T0 379 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 ARMCX3Q9UH62 379 aaPredicted RBP13.83□□□□□ -0.2
SRSF3-201ENST00000339436 DSEQ9UL01 958 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 COG5Q9UP83 839 aa13.83□□□□□ -0.2
SRSF3-201ENST00000339436 TIMM13Q9Y5L4 95 aaPredicted RBP13.83□□□□□ -0.2
SRSF3-201ENST00000339436 CYB561D2O14569 222 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms