RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TBC1D13Q9NVG8 400 aa15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 BZW2Q9Y6E2 419 aaKnown RBP15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 PTPRSQ13332 1948 aa15.58■□□□□ 0.09
NIPAL3-202ENST00000339255 ASPAP45381 313 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 KCNJ6P48051 423 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 AFF1P51825 1210 aaKnown RBP15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 UPP1Q16831 310 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 ARHGAP44Q17R89 818 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 TMTC1Q8IUR5 882 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 TNS4Q8IZW8 715 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 LRRC43Q8N309 656 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 TOP1MTQ969P6 601 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 FAM193BQ96PV7 902 aaPredicted RBP15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 GOLGA2P5Q9HBQ8 144 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.58■□□□□ 0.082e-6■■■■■ 121.8
NIPAL3-202ENST00000339255 MIOSQ9NXC5 875 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 GDAP2Q9NXN4 497 aa15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 NXF1Q9UBU9 619 aaKnown RBP15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 AJAP1Q9UKB5 411 aaPredicted RBP15.58■□□□□ 0.08
NIPAL3-202ENST00000339255 RBAK-RBAKDNI3L0D1 243 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 PODXLO00592 558 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 FGBP02675 491 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 ASIC2Q16515 512 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 CYP26C1Q6V0L0 522 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 FAM71AQ8IYT1 594 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 DPF3Q92784 378 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 CASD1Q96PB1 797 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 ARID3AQ99856 593 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 GPR88Q9GZN0 384 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 MTIF3Q9H2K0 278 aaKnown RBP15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 NR2E3Q9Y5X4 410 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 ARHGEF37A1IGU5 675 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 CARNS1A5YM72 827 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 KPNA7A9QM74 516 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 DGKIO75912 1065 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 SERPING1P05155 500 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 ACRP10323 421 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 ANXA13P27216 316 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 BPIFB4P59827 614 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 LILRA4P59901 499 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 GOLGA8FQ08AF8 430 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 GOLGA8DPQ0D2H9 430 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 CNTN6Q9UQ52 1028 aa15.57■□□□□ 0.08
NIPAL3-202ENST00000339255 CASTOR2A6NHX0 329 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 TMEM189-UBE2V1I3L0A0 370 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 FOXN3O00409 490 aaPredicted RBP15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 ARHGAP6O43182 974 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 PRKCIP41743 596 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 CLCNKBP51801 687 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 SCARA3Q6AZY7 606 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 WDR59Q6PJI9 974 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 DCLRE1AQ6PJP8 1040 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 ZNF365Q70YC5 407 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 OTOP2Q7RTS6 562 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 TMEM139Q8IV31 216 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 KAT5Q92993 513 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 DNAI2Q9GZS0 605 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 CISHQ9NSE2 258 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 SNX9Q9Y5X1 595 aa15.56■□□□□ 0.08
NIPAL3-202ENST00000339255 COL4A6Q14031 1691 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 TBKBP1A7MCY6 615 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 PPEF2O14830 753 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 GFPT2O94808 682 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 FAM163BP0C2L3 166 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 SKILP12757 684 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 KRT5P13647 590 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 ACO1P21399 889 aaKnown RBP15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 AARSP49588 968 aaKnown RBP eCLIP15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 CCZ1BP86790 482 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 CCZ1P86791 482 aaPredicted RBP15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 KLHL30Q0D2K2 578 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 INCA1Q0VD86 236 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 E4F1Q66K89 784 aaPredicted RBP15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 SCARA5Q6ZMJ2 495 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 C16orf59Q7L2K0 433 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 DPH6Q7L8W6 267 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 IRF2BP2Q7Z5L9 587 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 VPS36Q86VN1 386 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 COLGALT2Q8IYK4 626 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 TOP6BLQ8N6T0 577 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 UBR7Q8N806 425 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 MMS19Q96T76 1030 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 TMEM175Q9BSA9 504 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 TSC2P49815 1807 aa15.55■□□□□ 0.08
NIPAL3-202ENST00000339255 SSU72P8A0A1W2PR75 194 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 HUS1O60921 280 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 B3GAT3O94766 335 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 UPP2O95045 317 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 SYN1P17600 705 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 USP8P40818 1118 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 DEFB103AP81534 67 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 ARID5AQ03989 594 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 TDRD12Q587J7 1177 aaKnown RBP15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 TMEM240Q5SV17 173 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 LIMS2Q7Z4I7 341 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 CMTR2Q8IYT2 770 aaKnown RBP15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 CCDC170Q8IYT3 715 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 TMEM130Q8N3G9 435 aa15.54■□□□□ 0.08
NIPAL3-202ENST00000339255 APPL2Q8NEU8 664 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms