RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ROBO3Q96MS0 1386 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 ECE2O60344 883 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 UNC5CO95185 931 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 WEE2P0C1S8 567 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 POLGP54098 1239 aaPredicted RBP14.94□□□□□ -0.02
PCDH8-201ENST00000338862 TMPRSS15P98073 1019 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 THOC5Q13769 683 aaKnown RBP14.94□□□□□ -0.02
PCDH8-201ENST00000338862 SLC1A5Q15758 541 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 CCDC110Q8TBZ0 833 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 ZFATQ9P243 1243 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 GINS2Q9Y248 185 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 H3BRJ5 948 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 CIB2O75838 187 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 GYS1P13807 737 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 CHRNA5P30532 468 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 ALDH18A1P54886 795 aaKnown RBP14.94□□□□□ -0.02
PCDH8-201ENST00000338862 HIF1AQ16665 826 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 MFSD7Q6UXD7 560 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 SCOCQ9UIL1 159 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 SPATA31A5Q5VU36 1347 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 SPATA31A7Q8IWB4 1347 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 TRPM3Q9HCF6 1732 aaPredicted RBP14.93□□□□□ -0.02
PCDH8-201ENST00000338862 I3L4J1 428 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 LPXNO60711 386 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 TOM1L1O75674 476 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 PSMD10O75832 226 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 MMP10P09238 476 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 RARRES1P49788 294 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 WDR4P57081 412 aaKnown RBP14.93□□□□□ -0.02
PCDH8-201ENST00000338862 TEKT4Q8WW24 435 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 ZBTB45Q96K62 511 aaPredicted RBP14.93□□□□□ -0.02
PCDH8-201ENST00000338862 PPP1R36Q96LQ0 422 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 WHRNQ9P202 907 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 ZMYM2Q9UBW7 1377 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 F8VP50 259 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 NVLO15381 856 aaKnown RBP14.93□□□□□ -0.02
PCDH8-201ENST00000338862 GRAP2O75791 330 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 TCF4P15884 667 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 MAN1A1P33908 653 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 NFX1Q12986 1120 aaKnown RBP14.93□□□□□ -0.02
PCDH8-201ENST00000338862 BBOF1Q8ND07 529 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 FAM13CQ8NE31 585 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 TMEM39BQ9GZU3 492 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 KIAA1586Q9HCI6 787 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 FAM198AQ9UFP1 575 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 KRT36O76013 467 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 HLA-DRAP01903 254 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 ITGB5P18084 799 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 PSMA2P25787 234 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 HOXA7P31268 230 aaPredicted RBP14.93□□□□□ -0.02
PCDH8-201ENST00000338862 NPTX2P47972 431 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 PTDSS1P48651 473 aaKnown RBP14.93□□□□□ -0.02
PCDH8-201ENST00000338862 KLC1Q07866 573 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 MTFR1Q15390 333 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 CC2D2BQ6DHV5 1058 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 EMC1Q8N766 993 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 TAAR1Q96RJ0 339 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 IWS1Q96ST2 819 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 THTPAQ9BU02 230 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 MRPL47Q9HD33 250 aaKnown RBP14.93□□□□□ -0.02
PCDH8-201ENST00000338862 GAKO14976 1311 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 CNTNAP4Q9C0A0 1308 aa14.93□□□□□ -0.02
PCDH8-201ENST00000338862 TJP3O95049 919 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 SRGAP2CP0DJJ0 459 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 MARK3P27448 753 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 SERPINB3P29508 390 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 DRG2P55039 364 aaKnown RBP14.92□□□□□ -0.02
PCDH8-201ENST00000338862 GAD2Q05329 585 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 KPNB1Q14974 876 aaKnown RBP14.92□□□□□ -0.02
PCDH8-201ENST00000338862 RBBP5Q15291 538 aaKnown RBP14.92□□□□□ -0.02
PCDH8-201ENST00000338862 RFWD3Q6PCD5 774 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 CDAN1Q8IWY9 1227 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 THNSL1Q8IYQ7 743 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 MCOLN2Q8IZK6 566 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 DAW1Q8N136 415 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 TCP10LQ8TDR4 215 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 CACNA1SQ13698 1873 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 CYP3A7-CYP3A51PA0A087WV96 503 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 DPPA5A6NC42 116 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 SRRM3A6NNA2 597 aaPredicted RBP14.92□□□□□ -0.02
PCDH8-201ENST00000338862 STAM2O75886 525 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 CYP3A7P24462 503 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 PHBP35232 272 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 SERPINB6P35237 376 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 PGM1P36871 562 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 NT5C2P49902 561 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 TRAF1Q13077 416 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 ZNF268Q14587 947 aaPredicted RBP14.92□□□□□ -0.02
PCDH8-201ENST00000338862 UGCGQ16739 394 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 DARS2Q6PI48 645 aaKnown RBP14.92□□□□□ -0.02
PCDH8-201ENST00000338862 C1orf228Q6PIY5 440 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 FAM71DQ8N9W8 422 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 KCTD6Q8NC69 237 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 BATF3Q9NR55 127 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 TBX20Q9UMR3 447 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 CHKBQ9Y259 395 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 IVNS1ABPQ9Y6Y0 642 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 B2RBV5 119 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 SAT1P21673 171 aa14.92□□□□□ -0.02
PCDH8-201ENST00000338862 BGNP21810 368 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms