RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 PAEPP09466 180 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 HOXD10P28358 340 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 YARSP54577 528 aaKnown RBP17.35■□□□□ 0.37
HPS1-202ENST00000338546 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
HPS1-202ENST00000338546 SNX17Q15036 470 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 DEFB115Q30KQ5 88 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 LIN9Q5TKA1 542 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 RPAINQ86UA6 219 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 SESTD1Q86VW0 696 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 ZNF564Q8TBZ8 553 aaPredicted RBP17.35■□□□□ 0.37
HPS1-202ENST00000338546 NUP85Q9BW27 656 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 ARHGAP39Q9C0H5 1083 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 ARFGAP3Q9NP61 516 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 CNOT8Q9UFF9 292 aaKnown RBP17.35■□□□□ 0.37
HPS1-202ENST00000338546 LCMT1Q9UIC8 334 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 ALG6Q9Y672 507 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 RALGAPA2Q2PPJ7 1873 aa17.35■□□□□ 0.37
HPS1-202ENST00000338546 THAP12O43422 761 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 NPTXRO95502 500 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 KRT19P08727 400 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 NOMO3P69849 1222 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 PRKCZQ05513 592 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 RSPH3Q86UC2 560 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 UBL4BQ8N7F7 174 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 USP38Q8NB14 1042 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 PSMB7Q99436 277 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 NAP1L3Q99457 506 aaPredicted RBP17.34■□□□□ 0.37
HPS1-202ENST00000338546 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.34■□□□□ 0.376e-7■■□□□ 12.4
HPS1-202ENST00000338546 WNT8AQ9H1J5 351 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 CDHR5Q9HBB8 845 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 DPP3Q9NY33 737 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 TMEM59LQ9UK28 342 aa17.34■□□□□ 0.37
HPS1-202ENST00000338546 PACSIN2Q9UNF0 486 aaPredicted RBP17.34■□□□□ 0.37
HPS1-202ENST00000338546 PGRMC1O00264 195 aaKnown RBP17.33■□□□□ 0.37
HPS1-202ENST00000338546 MED7O43513 233 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 ITGB3P05106 788 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 RHOXF2BP0C7M4 288 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 CST5P28325 142 aaPredicted RBP17.33■□□□□ 0.37
HPS1-202ENST00000338546 CDH5P33151 784 aaPredicted RBP17.33■□□□□ 0.37
HPS1-202ENST00000338546 IRX5P78411 483 aaPredicted RBP17.33■□□□□ 0.37
HPS1-202ENST00000338546 TMEM62Q0P6H9 643 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 MON1BQ7L1V2 547 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 CYFIP2Q96F07 1278 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 CAPNS2Q96L46 248 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 SNX27Q96L92 541 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 RHOXF2Q9BQY4 288 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 EPC1Q9H2F5 836 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 MRPL47Q9HD33 250 aaKnown RBP17.33■□□□□ 0.37
HPS1-202ENST00000338546 CREBZFQ9NS37 354 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 GTF2IRD1Q9UHL9 959 aa17.33■□□□□ 0.37
HPS1-202ENST00000338546 CCDC188H7C350 402 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 DDX3YO15523 660 aaKnown RBP17.32■□□□□ 0.36
HPS1-202ENST00000338546 ZRANB2O95218 330 aaKnown RBP eCLIP17.32■□□□□ 0.36
HPS1-202ENST00000338546 GNRH1P01148 92 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 SLC1A1P43005 524 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 CACNB2Q08289 660 aaPredicted RBP17.32■□□□□ 0.36
HPS1-202ENST00000338546 C2orf54Q08AI8 447 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 ZBTB6Q15916 424 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 PPP2R5EQ16537 467 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 WDR72Q3MJ13 1102 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 NAA35Q5VZE5 725 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 CC2D1AQ6P1N0 951 aaPredicted RBP17.32■□□□□ 0.36
HPS1-202ENST00000338546 ALKAL1Q6UXT8 129 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 TMEM35BQ8NCS4 154 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 HPDLQ96IR7 371 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 PNKPQ96T60 521 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 CELF4Q9BZC1 486 aaKnown RBP17.32■□□□□ 0.36
HPS1-202ENST00000338546 LHX5Q9H2C1 402 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 CNTN3Q9P232 1028 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 GINS2Q9Y248 185 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 SCINQ9Y6U3 715 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 CCDC66A2RUB6 948 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 MYADML2A6NDP7 307 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 M0QZ92 97 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 XPOTO43592 962 aaKnown RBP17.32■□□□□ 0.36
HPS1-202ENST00000338546 CEP104O60308 925 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 ADAMTS4O75173 837 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 CALB1P05937 261 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 FGFR4P22455 802 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 CTNNA2P26232 953 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 TNNC1P63316 161 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 MYO1EQ12965 1108 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 XKR4Q5GH76 650 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 SCARA3Q6AZY7 606 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 LRRC52Q8N7C0 313 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 KLHDC9Q8NEP7 349 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 KIF12Q96FN5 646 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 MS4A14Q96JA4 679 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 TRIM6Q9C030 488 aaPredicted RBP17.32■□□□□ 0.36
HPS1-202ENST00000338546 GOLPH3Q9H4A6 298 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 ADAM22Q9P0K1 906 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 NXF1Q9UBU9 619 aaKnown RBP17.32■□□□□ 0.36
HPS1-202ENST00000338546 KIAA1257Q9ULG3 409 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 AGAP1Q9UPQ3 857 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 CEP83Q9Y592 693 aa17.32■□□□□ 0.36
HPS1-202ENST00000338546 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.32■□□□□ 0.36
HPS1-202ENST00000338546 TRIP12Q14669 1992 aaPredicted RBP17.31■□□□□ 0.36
HPS1-202ENST00000338546 WEE2P0C1S8 567 aa17.31■□□□□ 0.36
HPS1-202ENST00000338546 CD58P19256 250 aa17.31■□□□□ 0.36
HPS1-202ENST00000338546 MMP8P22894 467 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms