RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SLITRK6Q9H5Y7 841 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 KMT5AQ9NQR1 393 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 LRWD1Q9UFC0 647 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 RBM19Q9Y4C8 960 aaKnown RBP12.56□□□□□ -0.4
CSMD2-202ENST00000338325 YIPF1Q9Y548 306 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 STK24Q9Y6E0 443 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 TSC2P49815 1807 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.55□□□□□ -0.4
CSMD2-202ENST00000338325 CHURC1-FNTBB4DL54 471 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 MEFVO15553 781 aaPredicted RBP12.55□□□□□ -0.4
CSMD2-202ENST00000338325 HIP1RO75146 1068 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 MARCKSP29966 332 aaPredicted RBP12.55□□□□□ -0.4
CSMD2-202ENST00000338325 FNTBP49356 437 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 PLD1Q13393 1074 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 PPM1JQ5JR12 505 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 PRR23CQ6ZRP0 262 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.55□□□□□ -0.4
CSMD2-202ENST00000338325 SHKBP1Q8TBC3 707 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 SNX29Q8TEQ0 813 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 C8orf76Q96K31 380 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 C8orf33Q9H7E9 229 aaPredicted RBP12.55□□□□□ -0.4
CSMD2-202ENST00000338325 SEMA4GQ9NTN9 838 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 TUBGCP4Q9UGJ1 667 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 ANK1P16157 1881 aa12.55□□□□□ -0.4
CSMD2-202ENST00000338325 E9PMD0 336 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 CHADO15335 359 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 PAPSS2O95340 614 aaPredicted RBP12.54□□□□□ -0.4
CSMD2-202ENST00000338325 CNR2P34972 360 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 TRAPPC10P48553 1259 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 KPNA1P52294 538 aaPredicted RBP12.54□□□□□ -0.4
CSMD2-202ENST00000338325 DMWDQ09019 674 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 FCHO2Q0JRZ9 810 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 MAPK7Q13164 816 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 NOLC1Q14978 699 aaKnown RBP eCLIP12.54□□□□□ -0.4
CSMD2-202ENST00000338325 CSRP2Q16527 193 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 LONP2Q86WA8 852 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 TMC8Q8IU68 726 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 C4orf32Q8N8J7 132 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 BEST2Q8NFU1 509 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 RSPRY1Q96DX4 576 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 ZBTB45Q96K62 511 aaPredicted RBP12.54□□□□□ -0.4
CSMD2-202ENST00000338325 LRRC3Q9BY71 257 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 OXCT2Q9BYC2 517 aaPredicted RBP12.54□□□□□ -0.4
CSMD2-202ENST00000338325 C17orf75Q9HAS0 396 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 ANKFY1Q9P2R3 1169 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 DNM3Q9UQ16 869 aa12.54□□□□□ -0.4
CSMD2-202ENST00000338325 A0A1W2PRU2 124 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 SLC38A8A6NNN8 435 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 K7ESF4 209 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 M0QZQ0 153 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 SLC16A4O15374 487 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 HRO43593 1189 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 NEK4P51957 841 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 YWHAHQ04917 246 aaPredicted RBP12.53□□□□□ -0.4
CSMD2-202ENST00000338325 STRN3Q13033 797 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 PDIA5Q14554 519 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 ST3GAL2Q16842 350 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 SLC10A6Q3KNW5 377 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 IGSF22Q8N9C0 903 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 RUSC1Q9BVN2 902 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 RAB34Q9BZG1 259 aa12.53□□□□□ -0.4
CSMD2-202ENST00000338325 RBM12Q9NTZ6 932 aaKnown RBP12.53□□□□□ -0.4
CSMD2-202ENST00000338325 NOL7Q9UMY1 257 aaKnown RBP12.53□□□□□ -0.4
CSMD2-202ENST00000338325 MAP1BP46821 2468 aaKnown RBP12.52□□□□□ -0.4
CSMD2-202ENST00000338325 MYBPHLA2RUH7 354 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 SPECC1L-ADORA2AF8WAN1 911 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 FOXD2O60548 495 aaPredicted RBP12.52□□□□□ -0.4
CSMD2-202ENST00000338325 TOM1L1O75674 476 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 OAZ2O95190 189 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 VNN2O95498 520 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 OR4Q2P0C623 313 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 SOX9P48436 509 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 EPHB3P54753 998 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 SRSF5Q13243 272 aaKnown RBP12.52□□□□□ -0.4
CSMD2-202ENST00000338325 GNL2Q13823 731 aaKnown RBP12.52□□□□□ -0.4
CSMD2-202ENST00000338325 NBR1Q14596 966 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 SEZ6Q53EL9 994 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 WDR44Q5JSH3 913 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 DGKKQ5KSL6 1271 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 HEATR6Q6AI08 1181 aaKnown RBP12.52□□□□□ -0.4
CSMD2-202ENST00000338325 RINT1Q6NUQ1 792 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 Q6ZS52 159 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 RALGPS2Q86X27 583 aaPredicted RBP12.52□□□□□ -0.4
CSMD2-202ENST00000338325 FAM200AQ8TCP9 573 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 PGLYRP2Q96PD5 576 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 TIPINQ9BVW5 301 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 DNAJC25Q9H1X3 360 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 CRISPLD1Q9H336 500 aa12.52□□□□□ -0.4
CSMD2-202ENST00000338325 TIMM13Q9Y5L4 95 aaPredicted RBP12.52□□□□□ -0.4
CSMD2-202ENST00000338325 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.52□□□□□ -0.4
CSMD2-202ENST00000338325 DENND4CQ5VZ89 1909 aa12.52□□□□□ -0.41
CSMD2-202ENST00000338325 SPAG17Q6Q759 2223 aa12.52□□□□□ -0.41
CSMD2-202ENST00000338325 OR6C75A6NL08 312 aa12.52□□□□□ -0.41
CSMD2-202ENST00000338325 CXCL8P10145 99 aa12.52□□□□□ -0.41
CSMD2-202ENST00000338325 LRPAP1P30533 357 aa12.52□□□□□ -0.41
CSMD2-202ENST00000338325 CTHP32929 405 aa12.52□□□□□ -0.41
CSMD2-202ENST00000338325 ALDH1A3P47895 512 aa12.52□□□□□ -0.41
CSMD2-202ENST00000338325 AARSP49588 968 aaKnown RBP eCLIP12.52□□□□□ -0.41
CSMD2-202ENST00000338325 DUSP4Q13115 394 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms