RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 MICAL2O94851 1124 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 CD2BP2O95400 341 aaKnown RBP11.59□□□□□ -0.55
CAPN3-202ENST00000337571 CYP3A5P20815 502 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 DDIT3P35638 169 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 MCM6Q14566 821 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 UBXN2BQ14CS0 331 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 SF3A1Q15459 793 aaKnown RBP11.59□□□□□ -0.55
CAPN3-202ENST00000337571 MLF2Q15773 248 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-202ENST00000337571 ZC3H14Q6PJT7 736 aaKnown RBP11.59□□□□□ -0.55
CAPN3-202ENST00000337571 C1orf210Q8IVY1 113 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 CD302Q8IX05 232 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 KRI1Q8N9T8 703 aaKnown RBP11.59□□□□□ -0.55
CAPN3-202ENST00000337571 RAD54LQ92698 747 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 ELSPBP1Q96BH3 223 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 FOXQ1Q9C009 403 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 ZFP14Q9HCL3 533 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 CCDC39Q9UFE4 941 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 AFF4Q9UHB7 1163 aaKnown RBP11.59□□□□□ -0.55
CAPN3-202ENST00000337571 INSL5Q9Y5Q6 135 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 PDCD11Q14690 1871 aaKnown RBP11.59□□□□□ -0.55
CAPN3-202ENST00000337571 FRYLO94915 3013 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 FAM170BA6NMN3 283 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-202ENST00000337571 OAZ2O95190 189 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 SEC24AO95486 1093 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 MYL4P12829 197 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 PLCG1P19174 1290 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 PAX3P23760 479 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 LRPAP1P30533 357 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 TNFSF9P41273 254 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 ALDH1A3P47895 512 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 TWF1Q12792 350 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 PLD1Q13393 1074 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 KARSQ15046 597 aaKnown RBP11.58□□□□□ -0.56
CAPN3-202ENST00000337571 ZBTB6Q15916 424 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 ZBTB41Q5SVQ8 909 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 SLFN12LQ6IEE8 588 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 ARMCX5Q6P1M9 558 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 RNF19BQ6ZMZ0 732 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 ADSSL1Q8N142 457 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 LEMD2Q8NC56 503 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 BEST2Q8NFU1 509 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 LARP4BQ92615 738 aaKnown RBP11.58□□□□□ -0.56
CAPN3-202ENST00000337571 HAPLN2Q9GZV7 340 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 BRD9Q9H8M2 597 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 ASAH2Q9NR71 780 aa11.58□□□□□ -0.56
CAPN3-202ENST00000337571 SPATA6Q9NWH7 488 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-202ENST00000337571 MRPS17Q9Y2R5 130 aaKnown RBP11.58□□□□□ -0.56
CAPN3-202ENST00000337571 TIMM13Q9Y5L4 95 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-202ENST00000337571 NOTCH4Q99466 2003 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 MIA3Q5JRA6 1907 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 DMDP11532 3685 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 A0A0B4J269 797 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 OR6C75A6NL08 312 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 M0QZQ0 153 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 MEFVO15553 781 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-202ENST00000337571 LAMTOR5O43504 91 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 PIGRP01833 764 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 LMNAP02545 664 aaKnown RBP11.57□□□□□ -0.56
CAPN3-202ENST00000337571 CEBPBP17676 345 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 TXLNAP40222 546 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 ZNF131P52739 623 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 EPHB3P54753 998 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 ENOX2Q16206 610 aaKnown RBP11.57□□□□□ -0.56
CAPN3-202ENST00000337571 SLC5A9Q2M3M2 681 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 ADALQ6DHV7 355 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 TANGO2Q6ICL3 276 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 ZNF852Q6ZMS4 543 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 METTL23Q86XA0 190 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 KCNN1Q92952 543 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 TRMT61BQ9BVS5 477 aaKnown RBP11.57□□□□□ -0.56
CAPN3-202ENST00000337571 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 GPR88Q9GZN0 384 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 BLOC1S4Q9NUP1 217 aa11.57□□□□□ -0.56
CAPN3-202ENST00000337571 SP9P0CG40 484 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 ODC1P11926 461 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 CD72P21854 359 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 NMT1P30419 496 aaKnown RBP11.56□□□□□ -0.56
CAPN3-202ENST00000337571 MAGEA9P43362 315 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 LILRA4P59901 499 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 GTF2BQ00403 316 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 GPR17Q13304 367 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 TMEM132DQ14C87 1099 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 FAM78AQ5JUQ0 283 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 PRSS36Q5K4E3 855 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 SPATA1Q5VX52 437 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 RRAGBQ5VZM2 374 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 OVOS1Q6IE37 1185 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 JADE1Q6IE81 842 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 TPRG1Q6ZUI0 275 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 SV2BQ7L1I2 683 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 DNASE1L2Q92874 299 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 SMARCD2Q92925 531 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 IRF7Q92985 503 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 E2F7Q96AV8 911 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 TCEAL4Q96EI5 215 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 BORCS6Q96GS4 357 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 PGLYRP2Q96PD5 576 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 HINFPQ9BQA5 517 aa11.56□□□□□ -0.56
CAPN3-202ENST00000337571 DDX23Q9BUQ8 820 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms