RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ANKRD40Q6AI12 368 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 RASGRP2Q7LDG7 609 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 GSPT2Q8IYD1 628 aaKnown RBP13.7□□□□□ -0.22
HLCS-201ENST00000336648 MKNK1Q9BUB5 465 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 A2ML1A8K2U0 1454 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 PRAMEF22A3QJZ6 481 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 TEX33O43247 280 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 MAP3K13O43283 966 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 YWHABP31946 246 aaKnown RBP13.7□□□□□ -0.22
HLCS-201ENST00000336648 KBTBD12Q3ZCT8 623 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 C3orf20Q8ND61 904 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 DDHD1Q8NEL9 900 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 APPL2Q8NEU8 664 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 KATNAL1Q9BW62 490 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 RSAD1Q9HA92 442 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 HDAC6Q9UBN7 1215 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 AFF4Q9UHB7 1163 aaKnown RBP13.7□□□□□ -0.22
HLCS-201ENST00000336648 CFAP99D6REC4 459 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 EIF3HO15372 352 aaKnown RBP eCLIP13.7□□□□□ -0.22
HLCS-201ENST00000336648 MMP10P09238 476 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 ZNF473Q8WTR7 871 aaKnown RBP13.7□□□□□ -0.22
HLCS-201ENST00000336648 PPP2R3CQ969Q6 453 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 PLEKHA8Q96JA3 519 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 SIK2Q9H0K1 926 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 TMEM260Q9NX78 707 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 SLC30A1Q9Y6M5 507 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 NFIBO00712 420 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 NDUFS3O75489 264 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 SNRPAP09012 282 aaKnown RBP13.7□□□□□ -0.22
HLCS-201ENST00000336648 ALDH18A1P54886 795 aaKnown RBP13.7□□□□□ -0.22
HLCS-201ENST00000336648 PTK6Q13882 451 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 SYN2Q92777 582 aaPredicted RBP13.7□□□□□ -0.22
HLCS-201ENST00000336648 PTPRN2Q92932 1015 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 RAD21L1Q9H4I0 556 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 H2AFY2Q9P0M6 372 aaPredicted RBP13.7□□□□□ -0.22
HLCS-201ENST00000336648 GRID1Q9ULK0 1009 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 PDE5AO76074 875 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 PRDX5P30044 214 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 ST8SIA6P61647 398 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 NAB2Q15742 525 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 SHC4Q6S5L8 630 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 TRIM9Q9C026 710 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 TMEM161AQ9NX61 479 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 HSPBP1Q9NZL4 362 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 ZMYND8Q9ULU4 1186 aaPredicted RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 RHOBTB3O94955 611 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 SNRNP27Q8WVK2 155 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 EME1Q96AY2 570 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 ARL8AQ96BM9 186 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 PRMT1Q99873 361 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 SPATA16Q9BXB7 569 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 CATSPERBQ9H7T0 1116 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 PDS5AQ29RF7 1337 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 CYP26A1O43174 497 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 ENO1P06733 434 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 TRIM49P0CI25 452 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 TRIM49CP0CI26 452 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 STAT5BP51692 787 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 YAF2Q8IY57 180 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 LPAR1Q92633 364 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 XPO6Q96QU8 1125 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 SLC7A5P2Q9GIP4 190 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 CLASP2O75122 1294 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 FGFR4P22455 802 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 USP10Q14694 798 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 CCDC144BQ3MJ40 725 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 TTC39BQ5VTQ0 682 aaPredicted RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 CYFIP1Q7L576 1253 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 ADSSL1Q8N142 457 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 CLEC4FQ8N1N0 589 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 MOV10L1Q9BXT6 1211 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 NEU2Q9Y3R4 380 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 CPDO75976 1380 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 AKAP10O43572 662 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 H2AFYO75367 372 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 EIF2B5Q13144 721 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 AGBL1Q96MI9 1066 aa13.69□□□□□ -0.22
HLCS-201ENST00000336648 SRP68Q9UHB9 627 aaKnown RBP13.69□□□□□ -0.22
HLCS-201ENST00000336648 TRPC5OSA6NMA1 111 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 POLBP06746 335 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 TMEM253P0C7T8 217 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 CHN1P15882 459 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 PDGFRAP16234 1089 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 CNGA2Q16280 664 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 LONP2Q86WA8 852 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 GSG1L2A8MUP6 293 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 STRNO43815 780 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 PLA2G4AP47712 749 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 XRRA1Q6P2D8 792 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 CCT8L2Q96SF2 557 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 TDRD3Q9H7E2 651 aaKnown RBP13.68□□□□□ -0.22
HLCS-201ENST00000336648 COL15A1P39059 1388 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 CDC42BPGQ6DT37 1551 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 SAMD9LQ8IVG5 1584 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 ZC3H4Q9UPT8 1303 aaKnown RBP13.68□□□□□ -0.22
HLCS-201ENST00000336648 UGGT1Q9NYU2 1555 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 LCP1P13796 627 aa13.68□□□□□ -0.22
HLCS-201ENST00000336648 FMO5P49326 533 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms