RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 ZNF606Q8WXB4 792 aa17.76■□□□□ 0.43
TMEM39B-201ENST00000336294 ZNF668Q96K58 619 aaPredicted RBP17.76■□□□□ 0.43
TMEM39B-201ENST00000336294 TRIM7Q9C029 511 aa17.76■□□□□ 0.43
TMEM39B-201ENST00000336294 RBM47A0AV96 593 aaKnown RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 GOLGA6L10A6NI86 522 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 FSCN2O14926 492 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 MAGEB2O15479 319 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 LSM8O95777 96 aaKnown RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 RARAP10276 462 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 INSRRP14616 1297 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 COILP38432 576 aaPredicted RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 GTF2A2P52657 109 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 YWHAEP62258 255 aaKnown RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 IGBP1P78318 339 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 SLC20A2Q08357 652 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 PTP4A2Q12974 167 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 SIX1Q15475 284 aaPredicted RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 UAP1Q16222 522 aaPredicted RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 ZNF699Q32M78 642 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 SPDYCQ5MJ68 293 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 EEF1DP3Q658K8 133 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 SCARA3Q6AZY7 606 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 PLEKHA7Q6IQ23 1121 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 TTC27Q6P3X3 843 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 MMS22LQ6ZRQ5 1243 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 ZNF467Q7Z7K2 595 aaPredicted RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 PPTC7Q8NI37 304 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 UBLCP1Q8WVY7 318 aaPredicted RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 CDT1Q9H211 546 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 RPF1Q9H9Y2 349 aaKnown RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 PARP2Q9UGN5 583 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 RRP15Q9Y3B9 282 aaKnown RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 IVNS1ABPQ9Y6Y0 642 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 PLXNB2O15031 1838 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 PLXNA1Q9UIW2 1896 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 TCRBV7S2A1N4TA0A589 114 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 STRNO43815 780 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 FLT3P36888 993 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 GCLCP48506 637 aaPredicted RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 DHX9Q08211 1270 aaKnown RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 MAMLD1Q13495 774 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 FAM187BQ17R55 369 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 C2CD6Q53TS8 623 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 CEP85LQ5SZL2 805 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 LLGL2Q6P1M3 1020 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 CCDC105Q8IYK2 499 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 EMID1Q96A84 441 aaPredicted RBP17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 ZBTB10Q96DT7 871 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 FAM107BQ9H098 131 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 ZNF408Q9H9D4 720 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 CISHQ9NSE2 258 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 ZDHHC18Q9NUE0 388 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 PARVAQ9NVD7 372 aa17.75■□□□□ 0.43
TMEM39B-201ENST00000336294 COL1A2P08123 1366 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 HMGB1P1B2RPK0 211 aaPredicted RBP17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 BTBD19C9JJ37 291 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 PSTPIP1O43586 416 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 PPFIA2O75334 1257 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 CD58P19256 250 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 SSTR3P32745 418 aaPredicted RBP17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 OSTNP61366 133 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 GJC2Q5T442 439 aaPredicted RBP17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 MS4A4AQ96JQ5 239 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 LRRC19Q9H756 370 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 MINDY3Q9H8M7 445 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 CLEC11AQ9Y240 323 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 SNX24Q9Y343 169 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 ZSWIM8A7E2V4 1837 aa17.74■□□□□ 0.43
TMEM39B-201ENST00000336294 CCL15-CCL14A0A0B4J2E2 113 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 H0YGN5 161 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 CALB1P05937 261 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 MMP8P22894 467 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 MAN1A1P33908 653 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 TNFAIP2Q03169 654 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 CCL15Q16663 113 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 EMC10Q5UCC4 262 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 MAMDC4Q6UXC1 1216 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 IFNLR1Q8IU57 520 aaPredicted RBP17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 RHOT1Q8IXI2 618 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 LINC01465Q8N7H1 131 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 DDX27Q96GQ7 796 aaKnown RBP17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 ATP6V1G3Q96LB4 118 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 ZNF518BQ9C0D4 1074 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 IFT122Q9HBG6 1241 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 TMBIM4Q9HC24 238 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 MORF4L1Q9UBU8 362 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 NFS1Q9Y697 457 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 PASKQ96RG2 1323 aa17.73■□□□□ 0.43
TMEM39B-201ENST00000336294 TLR3O15455 904 aaKnown RBP17.72■□□□□ 0.43
TMEM39B-201ENST00000336294 MYZAPP0CAP1 466 aa17.72■□□□□ 0.43
TMEM39B-201ENST00000336294 CXCL8P10145 99 aa17.72■□□□□ 0.43
TMEM39B-201ENST00000336294 MCF2P10911 925 aa17.72■□□□□ 0.43
TMEM39B-201ENST00000336294 TMOD1P28289 359 aa17.72■□□□□ 0.43
TMEM39B-201ENST00000336294 IRX5P78411 483 aaPredicted RBP17.72■□□□□ 0.43
TMEM39B-201ENST00000336294 KCTD19Q17RG1 926 aaPredicted RBP17.72■□□□□ 0.43
TMEM39B-201ENST00000336294 SGO2Q562F6 1265 aa17.72■□□□□ 0.43
TMEM39B-201ENST00000336294 KCTD16Q68DU8 428 aa17.72■□□□□ 0.43
TMEM39B-201ENST00000336294 ANKRD23Q86SG2 305 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms