RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TNFSF9P41273 254 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 STAT5BP51692 787 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 PTP4A2Q12974 167 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 AUHQ13825 339 aaKnown RBP18.81■□□□□ 0.6
LRCH3-201ENST00000334859 FBXW10Q5XX13 1052 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 SCARA3Q6AZY7 606 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 C6orf89Q6UWU4 347 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 ZNF365Q70YC5 407 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 EEPD1Q7L9B9 569 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 ATL2Q8NHH9 583 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 OSBPL8Q9BZF1 889 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 LTBP3Q9NS15 1303 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 IGKV6D-21A0A0A0MT36 114 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 C5orf60A6NFR6 353 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 DRD4P21917 467 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 C1QBPQ07021 282 aaKnown RBP18.81■□□□□ 0.6
LRCH3-201ENST00000334859 KLF1Q13351 362 aaPredicted RBP18.81■□□□□ 0.6
LRCH3-201ENST00000334859 NOL9Q5SY16 702 aaKnown RBP18.81■□□□□ 0.6
LRCH3-201ENST00000334859 FAM160B1Q5W0V3 765 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 PLEKHA7Q6IQ23 1121 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 RHBDF2Q6PJF5 856 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 TAOK1Q7L7X3 1001 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 KATNAL2Q8IYT4 538 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 ATXN2LQ8WWM7 1075 aaKnown RBP18.81■□□□□ 0.6
LRCH3-201ENST00000334859 PRPF31Q8WWY3 499 aaKnown RBP18.81■□□□□ 0.6
LRCH3-201ENST00000334859 KCNN1Q92952 543 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 VCPIP1Q96JH7 1222 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 MTMR12Q9C0I1 747 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 TMEM134Q9H6X4 195 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 PARVAQ9NVD7 372 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 ANAPC5Q9UJX4 755 aa18.81■□□□□ 0.6
LRCH3-201ENST00000334859 FSBPO95073 299 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 IVDP26440 423 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 MARK3P27448 753 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 TCF7P36402 384 aaPredicted RBP18.8■□□□□ 0.6
LRCH3-201ENST00000334859 NCAPG2Q86XI2 1143 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 BRSK2Q8IWQ3 736 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.8■□□□□ 0.6
LRCH3-201ENST00000334859 MAF1Q9H063 256 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 HOMER3Q9NSC5 361 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 GOLGA6L7A0A1B0GV03 622 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 IFNAR2P48551 515 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 TARBP2Q15633 366 aaKnown RBP18.8■□□□□ 0.6
LRCH3-201ENST00000334859 MFSD5Q6N075 450 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.8■□□□□ 0.6
LRCH3-201ENST00000334859 ZNF606Q8WXB4 792 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 TRAIPQ9BWF2 469 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 BTBD7Q9P203 1132 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 CNTN6Q9UQ52 1028 aa18.8■□□□□ 0.6
LRCH3-201ENST00000334859 SRGAP2CP0DJJ0 459 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 RPL7AP62424 266 aaKnown RBP18.79■□□□□ 0.6
LRCH3-201ENST00000334859 VGLL4Q14135 290 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 ZNF394Q53GI3 561 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 PPP1R2P3Q6NXS1 205 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 LBX2Q6XYB7 198 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 GSTA5Q7RTV2 222 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 EXD1Q8NHP7 514 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 FEZF2Q8TBJ5 459 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 PWWP2AQ96N64 755 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 PRMT1Q99873 361 aaKnown RBP18.79■□□□□ 0.6
LRCH3-201ENST00000334859 MRPL4Q9BYD3 311 aaKnown RBP18.79■□□□□ 0.6
LRCH3-201ENST00000334859 ROPN1BQ9BZX4 212 aaPredicted RBP18.79■□□□□ 0.6
LRCH3-201ENST00000334859 ROPN1Q9HAT0 212 aaPredicted RBP18.79■□□□□ 0.6
LRCH3-201ENST00000334859 PI4K2BG5E9Z4 385 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 ASS1P00966 412 aaKnown RBP18.79■□□□□ 0.6
LRCH3-201ENST00000334859 CAV1Q03135 178 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 NEDD9Q14511 834 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 CCNG2Q16589 344 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 KYNUQ16719 465 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 ZPBP2Q6X784 338 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 WDR49Q8IV35 697 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 IPO4Q8TEX9 1081 aaKnown RBP18.79■□□□□ 0.6
LRCH3-201ENST00000334859 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 BBXQ8WY36 941 aaPredicted RBP18.79■□□□□ 0.6
LRCH3-201ENST00000334859 GPRC5DQ9NZD1 345 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 IP6K2Q9UHH9 426 aa18.79■□□□□ 0.6
LRCH3-201ENST00000334859 MAFO75444 373 aaPredicted RBP18.78■□□□□ 0.6
LRCH3-201ENST00000334859 TOM1L1O75674 476 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 TTC4O95801 387 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 CST3P01034 146 aaPredicted RBP18.78■□□□□ 0.6
LRCH3-201ENST00000334859 ATF7P17544 494 aaPredicted RBP18.78■□□□□ 0.6
LRCH3-201ENST00000334859 BRD2P25440 801 aaKnown RBP18.78■□□□□ 0.6
LRCH3-201ENST00000334859 CETN2P41208 172 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 ZNF132P52740 706 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 EFNA5P52803 228 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 MYL6P60660 151 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 PDE4CQ08493 712 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 ZNF568Q3ZCX4 644 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 SH3D19Q5HYK7 790 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 KAZNQ674X7 775 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 CHADLQ6NUI6 762 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 SCARA5Q6ZMJ2 495 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 TRIM50Q86XT4 487 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 CCDC89Q8N998 374 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 ZNF317Q96PQ6 595 aaPredicted RBP18.78■□□□□ 0.6
LRCH3-201ENST00000334859 PPP2R3BQ9Y5P8 575 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 SNCAIPQ9Y6H5 919 aa18.78■□□□□ 0.6
LRCH3-201ENST00000334859 SOWAHBA6NEL2 793 aa18.77■□□□□ 0.6
LRCH3-201ENST00000334859 KRT1P04264 644 aa18.77■□□□□ 0.6
LRCH3-201ENST00000334859 TCF4P15884 667 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms